RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 TPM3P06753 285 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 HEXBP07686 556 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 ITGAMP11215 1152 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 CCR7P32248 378 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 FOXN2P32314 431 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 ZNF33BQ06732 778 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 GRB7Q14451 532 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 TESK1Q15569 626 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 CCDC38Q502W7 563 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 ABHD17BQ5VST6 288 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 NEK10Q6ZWH5 1172 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 LKAAEAR1Q8TD35 194 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 CABS1Q96KC9 395 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 TRPC4Q9UBN4 977 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 SYCE3A1L190 88 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 IQCF5A8MTL0 148 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 F8W8V4 182 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 WISP2O76076 250 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 CLDN14O95500 239 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 MYBL2P10244 700 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 TLE4Q04727 773 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 TRIM14Q14142 442 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 MUM1Q2TAK8 710 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 TTC23LQ6PF05 361 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 UNC5DQ6UXZ4 953 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
PNKP-218ENST00000625299 TAB3Q8N5C8 712 aaPredicted RBP13.97□□□□□ -0.17
PNKP-218ENST00000625299 SKA2Q8WVK7 121 aaPredicted RBP13.97□□□□□ -0.17
PNKP-218ENST00000625299 ZUFSPQ96AP4 578 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 C10orf90Q96M02 699 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 TSSK1BQ9BXA7 367 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 TSPAN10Q9H1Z9 355 aaPredicted RBP13.97□□□□□ -0.17
PNKP-218ENST00000625299 LRRC40Q9H9A6 602 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 INTUQ9ULD6 942 aa13.97□□□□□ -0.17
PNKP-218ENST00000625299 KRT87PA6NCN2 255 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 A8MUI8 341 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 TARM1B6A8C7 271 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 PJA2O43164 708 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 APOA4P06727 396 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 TPM1P09493 284 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 CAPN3P20807 821 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 BDKRB1P46663 353 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 ZNF766Q5HY98 468 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 SPNS3Q6ZMD2 512 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 RIPOR1Q6ZS17 1223 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 KRT222Q8N1A0 295 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 RAB42Q8N4Z0 105 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 TTC1Q99614 292 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 RAB11FIP5Q9BXF6 653 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 RNF32Q9H0A6 362 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 STMN3Q9NZ72 180 aa13.96□□□□□ -0.17
PNKP-218ENST00000625299 IGLV3-12A0A075B6K2 115 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 MROH6A6NGR9 719 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 METTL18O95568 372 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 GOT2P00505 430 aaKnown RBP13.95□□□□□ -0.18
PNKP-218ENST00000625299 AGAP20933 346 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 ST13P50502 369 aaKnown RBP13.95□□□□□ -0.18
PNKP-218ENST00000625299 DSG2Q14126 1118 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 PCOLCEQ15113 449 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 TMED2Q15363 201 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 PARP6Q2NL67 630 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 KCTD11Q693B1 232 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 AFTPHQ6ULP2 937 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 RNF44Q7L0R7 432 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 OR2L3Q8NG85 312 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 GSDMBQ8TAX9 411 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 HDAC10Q969S8 669 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 MMABQ96EY8 250 aaPredicted RBP13.95□□□□□ -0.18
PNKP-218ENST00000625299 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 ENAMQ9NRM1 1142 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 C14orf105Q9NVL8 296 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 TEKT2Q9UIF3 430 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 TSR3Q9UJK0 312 aaKnown RBP13.95□□□□□ -0.18
PNKP-218ENST00000625299 CDC14AQ9UNH5 594 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 TFR2Q9UP52 801 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 RUVBL2Q9Y230 463 aaKnown RBP13.95□□□□□ -0.18
PNKP-218ENST00000625299 NEU2Q9Y3R4 380 aa13.95□□□□□ -0.18
PNKP-218ENST00000625299 PRPF4O43172 522 aaKnown RBP eCLIP13.94□□□□□ -0.18
PNKP-218ENST00000625299 MFAP3LO75121 409 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 GPC4O75487 556 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 FKBP9O95302 570 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ANXA5P08758 320 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
PNKP-218ENST00000625299 COPS2P61201 443 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 AP2B1P63010 937 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ALDH6A1Q02252 535 aaKnown RBP13.94□□□□□ -0.18
PNKP-218ENST00000625299 SYT16Q17RD7 645 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 KRTAP21-3Q3LHN1 58 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 CCSMST1Q4G0I0 132 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 FCRLBQ6BAA4 426 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 MEX3BQ6ZN04 569 aaKnown RBP13.94□□□□□ -0.18
PNKP-218ENST00000625299 KLHDC8BQ8IXV7 354 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 FAM71DQ8N9W8 422 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 OR6P1Q8NGX9 317 aa13.94□□□□□ -0.18
PNKP-218ENST00000625299 ADAMTS18Q8TE60 1221 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms