RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 DOK6Q6PKX4 331 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 ZNF517Q6ZMY9 492 aaPredicted RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 METTL23Q86XA0 190 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 RGL4Q8IZJ4 473 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CYP4Z2PQ8N1L4 340 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CARNMT1Q8N4J0 409 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 CHCHD4Q8N4Q1 142 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 DNAJC22Q8N4W6 341 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 RMDN1Q96DB5 314 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 REEP1Q9H902 201 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 PLCXD1Q9NUJ7 323 aa13.73□□□□□ -0.21
LDB3-209ENST00000623056 PAQR5Q9NXK6 330 aaPredicted RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 ZNF490Q9ULM2 529 aaPredicted RBP13.73□□□□□ -0.21
LDB3-209ENST00000623056 MICAL3Q7RTP6 2002 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 A0A1W2PQ67 120 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CLCA1A8K7I4 914 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CTDSP2O14595 271 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TAPBPO15533 448 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 FFAR2O15552 330 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 PTHP01270 115 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 C1QCP02747 245 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ADORA3P0DMS8 318 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 BRCC3P46736 316 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 RGS6P49758 472 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CLCN7P51798 805 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CRISP3P54108 245 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TAF1AQ15573 450 aaPredicted RBP13.72□□□□□ -0.21
LDB3-209ENST00000623056 FBXO43Q4G163 708 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ARMCX4Q5H9R4 360 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ADAMTSL2Q86TH1 951 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 OR8H2Q8N162 312 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 KCNC2Q96PR1 638 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 KCNS3Q9BQ31 491 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 GABARAPL3Q9BY60 117 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 AASDHPPTQ9NRN7 309 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ELOVL2Q9NXB9 296 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ACTL7AQ9Y615 435 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TRIP12Q14669 1992 aaPredicted RBP13.72□□□□□ -0.21
LDB3-209ENST00000623056 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 C2orf81A6NN90 581 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 PDHXO00330 501 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ULK1O75385 1050 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 FKBP9O95302 570 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 GUCA1CO95843 209 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 STSP08842 583 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 SOX6P35712 828 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 UPP1Q16831 310 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TBRG1Q3YBR2 411 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 MLIPQ5VWP3 458 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 RAB43Q86YS6 212 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 RASSF5Q8WWW0 418 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TMCO6Q96DC7 493 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CLIP3Q96DZ5 547 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 HSH2DQ96JZ2 352 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CEP19Q96LK0 163 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 PHOX2BQ99453 314 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 GDF15Q99988 308 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 SLC30A2Q9BRI3 323 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 TTPALQ9BTX7 342 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 GPR83Q9NYM4 423 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 SPASTQ9UBP0 616 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 PTPRDP23468 1912 aa13.72□□□□□ -0.21
LDB3-209ENST00000623056 CCL15-CCL14A0A0B4J2E2 113 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 CCRL2O00421 344 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 F2P00734 622 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 GDF5P43026 501 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 NUDT6P53370 316 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 ITGA1P56199 1179 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 CCL15Q16663 113 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 TTLL9Q3SXZ7 439 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 PAF1Q8N7H5 531 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 HASPINQ8TF76 798 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 RNF170Q96K19 258 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 CEP295NLQ96MC4 621 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 RAD9AQ99638 391 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 SLA2Q9H6Q3 261 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 BPIFA1Q9NP55 256 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 GPRC5BQ9NZH0 403 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 RPS6KA6Q9UK32 745 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 TRAPPC4Q9Y296 219 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 DLGAP4Q9Y2H0 992 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 SNX8Q9Y5X2 465 aa13.71□□□□□ -0.21
LDB3-209ENST00000623056 ARL5CA6NH57 179 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 MOXD2PA6NHM9 499 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 MANBAO00462 879 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 CA12O43570 354 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 KIAA0513O60268 411 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 C9P02748 559 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 HSMCR30P0CW71 290 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 OR1E1P30953 314 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 GGT2P36268 569 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 RFX2P48378 723 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 CLCN4P51793 760 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 RPS14P62263 151 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms