RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PROKR1Q8TCW9 393 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 SLC5A11Q8WWX8 675 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ROPN1LQ96C74 230 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ZBTB18Q99592 522 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 FOXQ1Q9C009 403 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ASIC5Q9NY37 505 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 ADA2Q9NZK5 511 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 PACSIN3Q9UKS6 424 aa20.75■□□□□ 0.91
SPAST-204ENST00000621856 LMNAP02545 664 aaKnown RBP20.74■□□□□ 0.91
SPAST-204ENST00000621856 C1GALT1C1LP0DN25 315 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 PRPH2P23942 346 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 IL12AP29459 219 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 DPP6P42658 865 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 YPEL5P62699 121 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 PAGE2BQ5JRK9 111 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 TPRG1LQ5T0D9 272 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 ATG9BQ674R7 924 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 MED27Q6P2C8 311 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 LCTLQ6UWM7 567 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 TSACCQ96A04 125 aaPredicted RBP20.74■□□□□ 0.91
SPAST-204ENST00000621856 REPS1Q96D71 796 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 HAUS8Q9BT25 410 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 EFCAB11Q9BUY7 163 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 GPR174Q9BXC1 333 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 EBF2Q9HAK2 575 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 WNT16Q9UBV4 365 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 PCDHGA7Q9Y5G6 932 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 HS3ST3A1Q9Y663 406 aa20.74■□□□□ 0.91
SPAST-204ENST00000621856 A0A1W2PP18 115 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 PRR19A6NJB7 356 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 PRAMEF26H0Y7S4 382 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 IGHV4-34P06331 123 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 ERGP11308 486 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 MAPK1P28482 360 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 ZFP36L2P47974 494 aaKnown RBP20.73■□□□□ 0.91
SPAST-204ENST00000621856 SLBPQ14493 270 aaKnown RBP eCLIP20.73■□□□□ 0.91
SPAST-204ENST00000621856 CLCA4Q14CN2 919 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 CYP2A13Q16696 494 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 COQ5Q5HYK3 327 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 NXPE4Q6UWF7 544 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 ADHFE1Q8IWW8 467 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 VPS33AQ96AX1 596 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 SH3KBP1Q96B97 665 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 MTERF1Q99551 399 aaKnown RBP20.73■□□□□ 0.91
SPAST-204ENST00000621856 DPY30Q9C005 99 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 IL1RL2Q9HB29 575 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 PRDM8Q9NQV8 689 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 GID8Q9NWU2 228 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 JAK1P23458 1154 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 CD6P30203 668 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 STARD6P59095 220 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 ACTR3P61158 418 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 HIST2H2ACQ16777 129 aaPredicted RBP20.73■□□□□ 0.91
SPAST-204ENST00000621856 UAP1L1Q3KQV9 507 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 TIGD2Q4W5G0 525 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 PIGGQ5H8A4 983 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 HIST2H2AA3Q6FI13 130 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 Q6ZSR6 202 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 SIX5Q8N196 739 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 OR7G3Q8NG95 312 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 WDR34Q96EX3 536 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 APIPQ96GX9 242 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 CAMK1GQ96NX5 476 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 ACAT2Q9BWD1 397 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 TPSD1Q9BZJ3 242 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 EHD1Q9H4M9 534 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 ACTL8Q9H568 366 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 RNPEPL1Q9HAU8 725 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 SLC52A3Q9NQ40 469 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 WSB2Q9NYS7 404 aaPredicted RBP20.73■□□□□ 0.91
SPAST-204ENST00000621856 MAP10Q9P2G4 905 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 LEF1Q9UJU2 399 aaPredicted RBP20.73■□□□□ 0.91
SPAST-204ENST00000621856 POMPQ9Y244 141 aa20.73■□□□□ 0.91
SPAST-204ENST00000621856 NPIPB8E9PQR5 432 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 H0Y3Z8 333 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 TNFRSF10CO14798 259 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 ANKRD28O15084 1053 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 RASGRP1O95267 797 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 BCKDHAP12694 445 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 HSD3B1P14060 373 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 HSD3B2P26439 372 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 LAPTM5Q13571 262 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 E2F2Q14209 437 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 PTGR1Q14914 329 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 KIAA0040Q15053 153 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 TCEA2Q15560 299 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 CCDC6Q16204 474 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 USP39Q53GS9 565 aaKnown RBP20.72■□□□□ 0.91
SPAST-204ENST00000621856 TMEM145Q8NBT3 493 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 SMPDL3AQ92484 453 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 NRTNQ99748 197 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 MVB12BQ9H7P6 319 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 VPS29Q9UBQ0 182 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 TAC3Q9UHF0 121 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 DMTF1Q9Y222 760 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 TMED5Q9Y3A6 229 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 PRUNE2Q8WUY3 3088 aa20.72■□□□□ 0.91
SPAST-204ENST00000621856 PCM1Q15154 2024 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 DYTNA2CJ06 578 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 OR52A4PA6NMU1 304 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms