RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PRDX1Q06830 199 aaKnown RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 NAE1Q13564 534 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 IL11RAQ14626 422 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 DEFB110Q30KQ9 67 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 TAOK1Q7L7X3 1001 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 TDRPQ86YL5 185 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 KDF1Q8NAX2 398 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 RHBDF1Q96CC6 855 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 TCTN2Q96GX1 697 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 FCRL4Q96PJ5 515 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 TMEM79Q9BSE2 394 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 TRIM54Q9BYV2 358 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 VPS11Q9H270 941 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 NMRAL1Q9HBL8 299 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 PDE7BQ9NP56 450 aa13.76□□□□□ -0.21
CBWD3-217ENST00000621474 CCDC177Q9NQR7 707 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 CUEDC1Q9NWM3 386 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-217ENST00000621474 OR2A25A4D2G3 310 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 NCF1BA6NI72 391 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 NCF1CA8MVU1 366 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TAPBPO15533 448 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 FKBP9O95302 570 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 NCF1P14598 390 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 NPPBP16860 134 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ZNF28P17035 718 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 GLRBP48167 497 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ACY1Q03154 408 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 RASA2Q15283 850 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PTCHD3Q3KNS1 767 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TAF1BQ53T94 588 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 FBXO48Q5FWF7 155 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 DCAF12Q5T6F0 453 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PRAMEF13Q5VWM6 474 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ZNF425Q6IV72 752 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 FIGLAQ6QHK4 219 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 SH2D5Q6ZV89 423 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PDPRQ8NCN5 879 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 OR1L3Q8NH93 324 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 SNIP1Q8TAD8 396 aaKnown RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 RHEBL1Q8TAI7 183 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ZCCHC14Q8WYQ9 949 aaKnown RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ZUFSPQ96AP4 578 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 MTBPQ96DY7 904 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 RNF31Q96EP0 1072 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 MED8Q96G25 268 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 DPH7Q9BTV6 452 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ABCF3Q9NUQ8 709 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TLK1Q9UKI8 766 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PILRAQ9UKJ1 303 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 USP24Q9UPU5 2620 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TARM1B6A8C7 271 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 KERAO60938 352 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TUBBP07437 444 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ANXA5P08758 320 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 SLC6A12P48065 614 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ARL4DP49703 201 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ACAP2Q15057 778 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 FAM83EQ2M2I3 478 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TECRLQ5HYJ1 363 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PRAMEF17Q5VTA0 474 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PWWP2BQ6NUJ5 590 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 LCTLQ6UWM7 567 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 CEACAM20Q6UY09 585 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 FRA10AC1Q70Z53 315 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 PPP1R3BQ86XI6 285 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 DTX1Q86Y01 620 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 GPSM1Q86YR5 675 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 TMEM151AQ8N4L1 468 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 STAG3L4Q8TBR4 150 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 FGF11Q92914 225 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ASPSCR1Q9BZE9 553 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 MRPS30Q9NP92 439 aaKnown RBP13.75□□□□□ -0.21
CBWD3-217ENST00000621474 ASB1Q9Y576 335 aa13.75□□□□□ -0.21
CBWD3-217ENST00000621474 IQANK1A0A1B0GTG1 560 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 A0A1W2PPM1 405 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 UBXN8O00124 270 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 DLGAP3O95886 979 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 SBK3P0C264 359 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 CCND1P24385 295 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 CMPK1P30085 196 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 GGT5P36269 586 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 GDF5P43026 501 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 HNMTP50135 292 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
CBWD3-217ENST00000621474 TMTC4Q5T4D3 741 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 LGSNQ5TDP6 509 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 CAPN13Q6MZZ7 669 aaPredicted RBP13.74□□□□□ -0.21
CBWD3-217ENST00000621474 RNF44Q7L0R7 432 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 PAQR7Q86WK9 346 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 ZFAND4Q86XD8 727 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 KLHDC8AQ8IYD2 350 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 SLC38A9Q8NBW4 561 aa13.74□□□□□ -0.21
CBWD3-217ENST00000621474 ATL1Q8WXF7 558 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms