RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 DIO3P55073 304 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ATP6V0D1P61421 351 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 APOFQ13790 326 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 C1DQ13901 141 aaKnown RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 PRRT3Q5FWE3 981 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CST9Q5W186 159 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 GDPD4Q6W3E5 623 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 NEK10Q6ZWH5 1172 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SERINC5Q86VE9 423 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 OR2AP1Q8NGE2 309 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 OR4A15Q8NGL6 344 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 LMX1AQ8TE12 382 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 IMP4Q96G21 291 aaKnown RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 UBXN10Q96LJ8 280 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SOX17Q9H6I2 414 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 LRTM1Q9HBL6 345 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 AMBNQ9NP70 447 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 GALPQ9UBC7 116 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ACTL7AQ9Y615 435 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CEPT1Q9Y6K0 416 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 COL6A6A6NMZ7 2263 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 TCRBV3S1A0A5B6 114 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 H3BNH8 94 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 LEFTY2O00292 366 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC22A3O75751 556 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF865P0CJ78 1059 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 C8orf89P0DMQ9 161 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 EPCAMP16422 314 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 HOXB8P17481 243 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 KIR3DL1P43629 444 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 GFOD2Q3B7J2 385 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CARD16Q5EG05 197 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 RABL3Q5HYI8 236 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SMARCD3Q6STE5 483 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 C17orf99Q6UX52 265 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 DRAXINQ8NBI3 349 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 TOP1MTQ969P6 601 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF354BQ96LW1 612 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SEC14L3Q9UDX4 400 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ANAPC2Q9UJX6 822 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 NEU3Q9UQ49 428 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 BRCA1P38398 1863 aaKnown RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ALPK2Q86TB3 2170 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 FOXD2O60548 495 aaPredicted RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 TSC22D2O75157 780 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CCNYL3P0C7X3 344 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CDK4P11802 303 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 LAMP2P13473 410 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 PCYT1AP49585 367 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 AP1S1P61966 158 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SPIBQ01892 262 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 RHAGQ02094 409 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 IL10RBQ08334 325 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 OR4D1Q15615 310 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 TRIM40Q6P9F5 258 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ERMP1Q7Z2K6 904 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC15A3Q8IY34 581 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 OR5AK3PQ8NH89 298 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF671Q8TAW3 534 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 BRSK1Q8TDC3 778 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 CDKN2AIPNLQ96HQ2 116 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 FBXL20Q96IG2 436 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 GPR174Q9BXC1 333 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 RBM38Q9H0Z9 239 aaKnown RBP8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 BRD7Q9NPI1 651 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 OLAHQ9NV23 265 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SMOXQ9NWM0 555 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC22A14Q9Y267 594 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 RALGAPA2Q2PPJ7 1873 aa8.07□□□□□ -1.12
PTPDC1-204ENST00000620992 FOSL2P15408 326 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 GPX3P22352 226 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 OXTRP30559 389 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TXNL4AP83876 142 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CACNG1Q06432 222 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 NNATQ16517 81 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 FBXO46Q6PJ61 603 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 DPY19L3Q6ZPD9 716 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 HMGN2P46Q86SG4 172 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CARM1Q86X55 608 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 PMM1Q92871 262 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 IRF7Q92985 503 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 ROPN1LQ96C74 230 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 NOL6Q9H6R4 1146 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 IL21RQ9HBE5 538 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 B4GALT6Q9UBX8 382 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CD300AQ9UGN4 299 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CNOT11Q9UKZ1 510 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 PLXNB2O15031 1838 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 A0A087WXM4 84 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 SNTNA6NMZ2 147 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 HAS3O00219 553 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 EI24O14681 340 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CST1P01037 141 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC35G6P0C7Q6 338 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 GNSP15586 552 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CD1DP15813 335 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 MYL12AP19105 171 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CLCQ05315 142 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF155Q12901 538 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms