RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SEMG2Q02383 582 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TAB1Q15750 504 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 POM121L1PQ3SYA9 428 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF404Q494X3 552 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 HECTD3Q5T447 861 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF691Q5VV52 312 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZCCHC8Q6NZY4 707 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 VN1R5Q7Z5H4 357 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SYT12Q8IV01 421 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 GOLM1Q8NBJ4 401 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF784Q8NCA9 323 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 NECTIN4Q96NY8 510 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 KCNC2Q96PR1 638 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 DPH2Q9BQC3 489 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SLIRPQ9GZT3 109 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 OSGEPL1Q9H4B0 414 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ASB8Q9H765 288 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 REEP1Q9H902 201 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SLC25A37Q9NYZ2 338 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 FKBPLQ9UIM3 349 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 PCDHB8Q9UN66 801 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SAMHD1Q9Y3Z3 626 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 DNMT3AQ9Y6K1 912 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 NUMA1Q14980 2115 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 LCTP09848 1927 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ILVBLA1L0T0 632 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ANKRD34BA5PLL1 514 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MROH6A6NGR9 719 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ULK1O75385 1050 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 RPP40O75818 363 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CTPS1P17812 591 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CRISP3P54108 245 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 NCF4Q15080 339 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TCEA2Q15560 299 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CYP27C1Q4G0S4 372 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TPRG1LQ5T0D9 272 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MBOAT1Q6ZNC8 495 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF598Q86UK7 904 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MON1AQ86VX9 555 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 HIPK1Q86Z02 1210 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 FAM217AQ8IXS0 508 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 C7orf61Q8IZ16 206 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 OR10T2Q8NGX3 314 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 GTF2H4Q92759 462 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 PGAP3Q96FM1 320 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 REXO5Q96IC2 774 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF641Q96N77 438 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 INPP5KQ9BT40 448 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 OR51E2Q9H255 320 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 KAT8Q9H7Z6 458 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TAS2R16Q9NYV7 291 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TMEFF2Q9UIK5 374 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MSRAQ9UJ68 235 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 NEU3Q9UQ49 428 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MED16Q9Y2X0 877 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 IFT52Q9Y366 437 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZNF646O15015 1829 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SIP14410 1827 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SMIM30A4D0T7 59 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 NOTOA8MTQ0 251 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 E2F3O00716 465 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SYN3O14994 580 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 FGF10O15520 208 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 UPK1BO75841 260 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CXCL14O95715 111 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ATXN1LP0C7T5 689 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ACRP10323 421 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 KCNE1P15382 129 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TYMPP19971 482 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MAPK1P28482 360 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 HOXD11P31277 338 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CLK3P49761 638 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 DAPP51397 102 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 FBXW4P57775 412 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 IRF8Q02556 426 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CNTN1Q12860 1018 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 CAMK2GQ13555 558 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SLC14A2Q15849 920 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SETMARQ53H47 684 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 RAB41Q5JT25 222 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 RETSATQ6NUM9 610 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 DOK6Q6PKX4 331 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TPGS1Q6ZTW0 290 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 TRMT11Q7Z4G4 463 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 METTL4Q8N3J2 472 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 SETD9Q8NE22 299 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 OR7D4Q8NG98 312 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 OR5K1Q8NHB7 308 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 RHBDF1Q96CC6 855 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 EGLN2Q96KS0 407 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MUC13Q9H3R2 512 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 MRM3Q9HC36 420 aaKnown RBP6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ACOT13Q9NPJ3 140 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 PLSCR3Q9NRY6 295 aa6.78□□□□□ -1.32
NEDD9-216ENST00000620854 ZIM2Q9NZV7 527 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms