RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 LPGAT1Q92604 370 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 C5orf34Q96MH7 638 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 BIRC8Q96P09 236 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 LMF1Q96S06 567 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 BARD1Q99728 777 aaKnown RBP11.4□□□□□ -0.59
UPF3B-204ENST00000619445 MIPEPQ99797 713 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 CRB3Q9BUF7 120 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 CCDC68Q9H2F9 335 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 SLC6A20Q9NP91 592 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 C14orf105Q9NVL8 296 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 LUZP4Q9P127 313 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 SLC5A6Q9Y289 635 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 KLHL20Q9Y2M5 609 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 HS3ST3B1Q9Y662 390 aa11.4□□□□□ -0.59
UPF3B-204ENST00000619445 ITPR2Q14571 2701 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 SOCS6O14544 535 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 MAP2K7O14733 419 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 USP1O94782 785 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 HPP00738 406 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 CTSBP07858 339 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ZSCAN5DPP0CG00 497 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ERGP11308 486 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 MLNP12872 115 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ENO3P13929 434 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ACPPP15309 386 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 CHRM3P20309 590 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 MGAT1P26572 445 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 RPA3P35244 121 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 MAGEA6P43360 314 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 PER3P56645 1201 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 CRADDP78560 199 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 GBX1Q14549 363 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 TLR1Q15399 786 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 NR6A1Q15406 480 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 EIF2S3LQ2VIR3 472 aaKnown RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 PRR30Q53SZ7 412 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 CNSTQ6PJW8 725 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 KIRREL2Q6UWL6 708 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ISLR2Q6UXK2 745 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 FAM20CQ8IXL6 584 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 FBXO15Q8NCQ5 510 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ST6GALNAC3Q8NDV1 305 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 GABPB2Q8TAK5 448 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 MFSD3Q96ES6 412 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 NAP1L3Q99457 506 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 EBNA1BP2Q99848 306 aaKnown RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 XAB2Q9HCS7 855 aaKnown RBP11.39□□□□□ -0.59
UPF3B-204ENST00000619445 ASF1BQ9NVP2 202 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 COMMD10Q9Y6G5 202 aa11.39□□□□□ -0.59
UPF3B-204ENST00000619445 PCSK5Q92824 1860 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 IGLV3-12A0A075B6K2 115 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 WIPF3A6NGB9 483 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 MYO1CO00159 1063 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CTSVO60911 334 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 SEMA7AO75326 666 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 PSIP1O75475 530 aaKnown RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 EZRP15311 586 aaKnown RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 FBLP22087 321 aaKnown RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 HRH2P25021 359 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CXCR2P25025 360 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 ARNTP27540 789 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 FMO4P31512 558 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 BDKRB1P46663 353 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 GLRBP48167 497 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 ABATP80404 500 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 MRPL49Q13405 166 aaKnown RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 DSG2Q14126 1118 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CRB2Q5IJ48 1285 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CTSL3PQ5NE16 218 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 LRRC8EQ6NSJ5 796 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 NEPROQ6NW34 567 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CASC4Q6P4E1 433 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 COX15Q7KZN9 410 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 MAMDC2Q7Z304 686 aaPredicted RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 PRUNE1Q86TP1 453 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 GAS2L3Q86XJ1 694 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CILP2Q8IUL8 1156 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 OR11G2Q8NGC1 345 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 DNAJB14Q8TBM8 379 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 STT3BQ8TCJ2 826 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CALML6Q8TD86 181 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 RERGQ96A58 199 aaPredicted RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CABS1Q96KC9 395 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 PLCD4Q9BRC7 762 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 DPH7Q9BTV6 452 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 MRPS30Q9NP92 439 aaKnown RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 SYBUQ9NX95 663 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CTSFQ9UBX1 484 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 ZC3H7BQ9UGR2 993 aaKnown RBP11.38□□□□□ -0.59
UPF3B-204ENST00000619445 CIDEBQ9UHD4 219 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 NFS1Q9Y697 457 aa11.38□□□□□ -0.59
UPF3B-204ENST00000619445 A0A0J9YVX5 310 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 FAM237BA0A1B0GVD1 139 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 A0A1W2PPV9 198 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 A0A1W2PQ72 361 aa11.37□□□□□ -0.59
UPF3B-204ENST00000619445 SDR42E2A6NKP2 422 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms