RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ARHGAP19Q14CB8 494 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 BORAQ6PGQ7 559 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 FAM198BQ6UWH4 519 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 CYHR1Q6ZMK1 362 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 STRA8Q7Z7C7 330 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 CCDC25Q86WR0 208 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF655Q8N720 491 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-228ENST00000618469 OR2A1Q8NGT9 310 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 FBXO25Q8TCJ0 367 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF480Q8WV37 535 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 CATSPER2Q96P56 530 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 SPRTNQ9H040 489 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-228ENST00000618469 EURLQ9NYK6 297 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 MOCS1Q9NZB8 636 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 TAC3Q9UHF0 121 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 PLAAQ9Y263 795 aa15.35■□□□□ 0.05
BRCA1-228ENST00000618469 FER1L5A0AVI2 2057 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 LRRK2Q5S007 2527 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 H3BMH7 237 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 C8GP07360 202 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 HBQ1P09105 142 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SAT1P21673 171 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 CMPK1P30085 196 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SSTR1P30872 391 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 HSD17B2P37059 387 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 POLE2P56282 527 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 RPS15P62841 145 aaKnown RBP15.34■□□□□ 0.05
BRCA1-228ENST00000618469 FOXK1P85037 733 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SLC7A5Q01650 507 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 CAV1Q03135 178 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 CBLBQ13191 982 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 KCNAB2Q13303 367 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 ERV3-1Q14264 604 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 TRADDQ15628 312 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 C1orf189Q5VU69 101 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 LCN10Q6JVE6 187 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 ZDHHC24Q6UX98 284 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 ZNF517Q6ZMY9 492 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SLC26A11Q86WA9 606 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
BRCA1-228ENST00000618469 MCATQ8IVS2 390 aaKnown RBP15.34■□□□□ 0.05
BRCA1-228ENST00000618469 PALM2Q8IXS6 379 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 TRIM44Q96DX7 344 aaPredicted RBP15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SELENOSQ9BQE4 189 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SLC6A20Q9NP91 592 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SMYD2Q9NRG4 433 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 NSMCE4AQ9NXX6 385 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 ADAMTS6Q9UKP5 1117 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SRPK3Q9UPE1 567 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 AP1M2Q9Y6Q5 423 aa15.34■□□□□ 0.05
BRCA1-228ENST00000618469 SPTAN1Q13813 2472 aaKnown RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 FAM95CA0A1B0GW59 222 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 CDC14CA4D256 554 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 C9J4A7 227 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 CREG1O75629 220 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 PIAS1O75925 651 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 CCNDBP1O95273 360 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 PTPN4P29074 926 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 IMPA1P29218 277 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 IL2P60568 153 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 YBX1P67809 324 aaKnown RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 NAA25Q14CX7 972 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 DEFB109BQ30KR1 87 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 CRTC2Q53ET0 693 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 ZC3H12BQ5HYM0 836 aaKnown RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 THEMIS2Q5TEJ8 643 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 RHBDD2Q6NTF9 364 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 TLDC1Q6P9B6 456 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 MBOAT1Q6ZNC8 495 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 ENDOVQ8N8Q3 282 aaKnown RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 DLG3Q92796 817 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 ZUFSPQ96AP4 578 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 LRRC1Q9BTT6 524 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 DPH7Q9BTV6 452 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 GPR87Q9BY21 358 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 PHACTR1Q9C0D0 580 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 MRPS30Q9NP92 439 aaKnown RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 TXLNGQ9NUQ3 528 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 DHCR7Q9UBM7 475 aaKnown RBP15.33■□□□□ 0.04
BRCA1-228ENST00000618469 VWA7Q9Y334 891 aa15.33■□□□□ 0.04
BRCA1-228ENST00000618469 ICE1Q9Y2F5 2266 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 A0A0J9YVX5 310 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 TCRBV9S1A1TA0A576 114 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 PABPN1LA6NDY0 278 aaKnown RBP15.32■□□□□ 0.04
BRCA1-228ENST00000618469 TARM1B6A8C7 271 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 E7ENX8 843 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 KIF2AO00139 706 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-228ENST00000618469 CTSVO60911 334 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 TSPAN12O95859 305 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 FURINP09958 794 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 AGXTP21549 392 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 TBPL1P62380 186 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 TAP2Q03519 686 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 IL10RAQ13651 578 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 ZNF460Q14592 562 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 SLC9A5Q14940 896 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 NCF4Q15080 339 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 PHKG1Q16816 387 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 ICE2Q659A1 982 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 ZNF385CQ66K41 422 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms