RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 AGPSO00116 658 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 PGRMC1O00264 195 aaKnown RBP21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 SRPX2O60687 465 aaPredicted RBP21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 ALBP02768 609 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 MMP11P24347 488 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 SLC1A2P43004 574 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 CUL1Q13616 776 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 INPP5JQ15735 1006 aaPredicted RBP21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 SHISA6Q6ZSJ9 500 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 SLC35F6Q8N357 371 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 GALNT11Q8NCW6 608 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 PNPLA2Q96AD5 504 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 SIGLEC10Q96LC7 697 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 PKP4Q99569 1192 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 DPH7Q9BTV6 452 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 ZNF552Q9H707 407 aaPredicted RBP21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 C5AR2Q9P296 337 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 STOX2Q9P2F5 926 aaPredicted RBP21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 VPS9D1Q9Y2B5 631 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 HS3ST3B1Q9Y662 390 aa21.24■□□□□ 0.99
NEDD4L-237ENST00000617539 HYKKA2RU49 373 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 SOCS6O14544 535 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 NRDCO43847 1150 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 PHF2O75151 1096 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 ALOX12BO75342 701 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 SOX8P57073 446 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 FBXO42Q6P3S6 717 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 EFCAB3Q8N7B9 438 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 TTC29Q8NA56 475 aaPredicted RBP21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 C10orf90Q96M02 699 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 OSBPL9Q96SU4 736 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 MESP1Q9BRJ9 268 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 SOX17Q9H6I2 414 aaPredicted RBP21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 ZBTB20Q9HC78 741 aaPredicted RBP21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 FBXL4Q9UKA2 621 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 MAU2Q9Y6X3 613 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 FAM169AQ9Y6X4 670 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 NAV2Q8IVL1 2488 aa21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 RP1L1Q8IWN7 2480 aaPredicted RBP21.23■□□□□ 0.99
NEDD4L-237ENST00000617539 CTAGE9A4FU28 777 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 VSTM2BA6NLU5 285 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 VPS4BO75351 444 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 SLC16A8O95907 504 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 IGHEP01854 428 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 CMPK1P30085 196 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 MPP1Q00013 466 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 THOC5Q13769 683 aaKnown RBP21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 ARHGAP19Q14CB8 494 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 PRTGQ2VWP7 1150 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 PLEKHN1Q494U1 663 aaPredicted RBP21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 NEK10Q6ZWH5 1172 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 PPFIBP2Q8ND30 876 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 ACTRT1Q8TDG2 376 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 SMPDL3AQ92484 453 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 KCNJ9Q92806 393 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 NACC2Q96BF6 587 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 ZFYVE21Q9BQ24 234 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 FAM114A2Q9NRY5 505 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 ZC3H7BQ9UGR2 993 aaKnown RBP21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 CDC23Q9UJX2 597 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 VPS4AQ9UN37 437 aa21.22■□□□□ 0.99
NEDD4L-237ENST00000617539 CATP04040 527 aaKnown RBP21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 PIM1P11309 404 aaPredicted RBP21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 FNTAP49354 379 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 PNLIPRP1P54315 467 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 LONRF1Q17RB8 773 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 FAM214AQ32MH5 1076 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 RNASEH2BQ5TBB1 312 aaKnown RBP21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 KIRREL2Q6UWL6 708 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 IGFL3Q6UXB1 125 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 CYHR1Q6ZMK1 362 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 PAQR7Q86WK9 346 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 CD200R1Q8TD46 325 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 ZNF480Q8WV37 535 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 ASB11Q8WXH4 323 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 NAP1L3Q99457 506 aaPredicted RBP21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 PLCD4Q9BRC7 762 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 SLAMF7Q9NQ25 335 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 C20orf96Q9NUD7 363 aaPredicted RBP21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 KLHL42Q9P2K6 505 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 MAD1L1Q9Y6D9 718 aa21.21■□□□□ 0.99
NEDD4L-237ENST00000617539 SPTAN1Q13813 2472 aaKnown RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 H0YGG7 62 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 EIF2S1P05198 315 aaKnown RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 RPA3P35244 121 aaPredicted RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 ARF3P61204 181 aaPredicted RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 TTLL9Q3SXZ7 439 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 ZNF425Q6IV72 752 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 LRRC56Q8IYG6 542 aaPredicted RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 FBXO15Q8NCQ5 510 aaPredicted RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 INPP5DQ92835 1189 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 C19orf60Q96EN9 201 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 PSMG3-AS1Q96PY0 264 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 GPR21Q99679 349 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 MRPS30Q9NP92 439 aaKnown RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 ATP13A2Q9NQ11 1180 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 TAC3Q9UHF0 121 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 NXT1Q9UKK6 140 aaKnown RBP21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 FBXO5Q9UKT4 447 aa21.2■□□□□ 0.98
NEDD4L-237ENST00000617539 SNX12Q9UMY4 172 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms