RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SLC35A5Q9BS91 424 aa5.88□□□□□ -1.47
RFX3-212ENST00000617270 DCSTAMPQ9H295 470 aa5.88□□□□□ -1.47
RFX3-212ENST00000617270 TUBG2Q9NRH3 451 aa5.88□□□□□ -1.47
RFX3-212ENST00000617270 C14orf105Q9NVL8 296 aa5.88□□□□□ -1.47
RFX3-212ENST00000617270 FKBPLQ9UIM3 349 aa5.88□□□□□ -1.47
RFX3-212ENST00000617270 PTBP2Q9UKA9 531 aaKnown RBP5.88□□□□□ -1.47
RFX3-212ENST00000617270 A0A0A6YYH2 397 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 A0A1B0GVM2 712 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 A6NJ64 397 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 RAB4AP20338 218 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 MLLT3P42568 568 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZNF616Q08AN1 781 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 MERTKQ12866 999 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 SLC1A5Q15758 541 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 TMEM44Q2T9K0 475 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CNPY1Q3B7I2 92 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 SLC25A52Q3SY17 297 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZACNQ401N2 412 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CARD16Q5EG05 197 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 DCLRE1AQ6PJP8 1040 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CPNE9Q8IYJ1 553 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CNTD1Q8N815 330 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 OR6Q1Q8NGQ2 317 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 DCAKDQ8WVC6 231 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 MSANTD3Q96H12 275 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GAS2L1Q99501 681 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 TSNAXQ99598 290 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 TMEM134Q9H6X4 195 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 PCDHGC4Q9Y5F7 938 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 POLR1AO95602 1720 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 A0A0J9YVX5 310 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 A0A1W2PPL8 197 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CPED1A4D0V7 1026 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 B4DGG1 531 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 BLOC1S5-TXNDC5H3BN57 136 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 NDUFS4O43181 175 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 NDST3O95803 873 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZNF35P13682 527 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 NOMO3P69849 1222 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GNMTQ14749 295 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 SLC22A16Q86VW1 577 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 TREML1Q86YW5 311 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GALNT12Q8IXK2 581 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 OR4K17Q8NGC6 315 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 JOSD2Q8TAC2 188 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CSPG4P5Q96PW8 444 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 OR5B12Q96R08 314 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ACO2Q99798 780 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 ANKHQ9HCJ1 492 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 OR2S2Q9NQN1 319 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 DUS2Q9NX74 493 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 BORCS7-ASMTA0A0B4J1R7 106 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 HMGN1P05114 100 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 KRBOX4Q5JUW0 171 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 LRRC66Q68CR7 880 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 VITQ6UXI7 678 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 C7orf50Q9BRJ6 194 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 TMEM185BQ9H7F4 350 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZCCHC3Q9NUD5 404 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 POFUT2Q9Y2G5 429 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 PCDHGA8Q9Y5G5 932 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 RIC1Q4ADV7 1423 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 A0A1B0GVI7 797 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CLCA1A8K7I4 914 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZNF670-ZNF695F2Z2N8 137 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 PCDH7O60245 1069 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 DDNO94850 711 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 TACR2P21452 398 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ATP5A1P25705 553 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 CAPSQ13938 189 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ABRAXAS2Q15018 415 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 TEX44Q53QW1 395 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 TMEM110Q86TL2 294 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 OR6N1Q8NGY5 312 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 SHKBP1Q8TBC3 707 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 CPNE2Q96FN4 548 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 COL21A1Q96P44 957 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ENAMQ9NRM1 1142 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 DNAJB9Q9UBS3 223 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 SCP2D1Q9UJQ7 156 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 MUSKO15146 869 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 IFNA5P01569 189 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ANXA3P12429 323 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 NPTX1Q15818 432 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 SSX2Q16385 188 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 DNM1P34Q6PK57 102 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GPAT4Q86UL3 456 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 NUDT13Q86X67 352 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 MSL3Q8N5Y2 521 aaKnown RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 GBA3Q9H227 469 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 PCDH10Q9P2E7 1040 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZNF282Q9UDV7 671 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 ZFP37Q9Y6Q3 630 aaPredicted RBP5.87□□□□□ -1.47
RFX3-212ENST00000617270 KIF1BO60333 1816 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 REREQ9P2R6 1566 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GRXCR1A8MXD5 290 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GSTT2P0CG29 244 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 PRPS2P11908 318 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 GNAZP19086 355 aa5.87□□□□□ -1.47
RFX3-212ENST00000617270 HNRNPKP61978 463 aaKnown RBP eCLIP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms