RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 RPLP0P05388 317 aaKnown RBP17.29■□□□□ 0.36
ATXN2-227ENST00000616825 AQP4P55087 323 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 MC1RQ01726 317 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 BLMHQ13867 455 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 SMU1Q2TAY7 513 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 LGI4Q8N135 537 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 OR2AJ1Q8NGZ0 328 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 COQ8BQ96D53 544 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 YIPF4Q9BSR8 244 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 FZD4Q9ULV1 537 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 B4DGG1 531 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 KLK1P06870 262 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 ENGP17813 658 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 DGKQP52824 942 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 SLC9A4Q6AI14 798 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 OR4F3Q6IEY1 312 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 OR2L5Q8NG80 312 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 ARMC5Q96C12 935 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 ZFP3Q96NJ6 502 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 CST11Q9H112 138 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 CFL2Q9Y281 166 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
ATXN2-227ENST00000616825 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 HAPLN1P10915 354 aaPredicted RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 MTHFD1P11586 935 aaKnown RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 TYRP14679 529 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 MAGEA11P43364 429 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 CBFBQ13951 182 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 TYSND1Q2T9J0 566 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 AGTRAPQ6RW13 159 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 HCAR2Q8TDS4 363 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 ASB9Q96DX5 294 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 INSL5Q9Y5Q6 135 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 TEX264Q9Y6I9 313 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 MTMR11A4FU01 709 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 PRKD3O94806 890 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 AGXTP21549 392 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 GGT5P36269 586 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 HSF2Q03933 536 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 NXPE1Q8N323 547 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 ZNF676Q8N7Q3 588 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 IRF7Q92985 503 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 OR52B2Q96RD2 323 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 MCCC2Q9HCC0 563 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 FARSBQ9NSD9 589 aaKnown RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 M0QX08 132 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 AREL1O15033 823 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 LINGO3P0C6S8 592 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 CDH1P12830 882 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 CXCR1P25024 350 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 ARCN1P48444 511 aaKnown RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 TXNL4AP83876 142 aaKnown RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 MERTKQ12866 999 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 SGCBQ16585 318 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 LY6G5CQ5SRR4 150 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 RASSF6Q6ZTQ3 369 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 ZNF527Q8NB42 609 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 CCDC54Q8NEL0 328 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 C9orf43Q8TAL5 461 aaPredicted RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 SLC2A6Q9UGQ3 507 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 TMED5Q9Y3A6 229 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 MMP20O60882 483 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 CSTF2P33240 577 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■■■□□ 18.7
ATXN2-227ENST00000616825 STC1P52823 247 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 VBP1P61758 197 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 OGDHQ02218 1023 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 GANABQ14697 944 aaKnown RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 TCEAL6Q6IPX3 200 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 C22orf39Q6P5X5 142 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 RASGEF1AQ8N9B8 481 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 PLA2G15Q8NCC3 412 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 GEMIN6Q8WXD5 167 aaKnown RBP17.28■□□□□ 0.36
ATXN2-227ENST00000616825 SIX4Q9UIU6 781 aa17.28■□□□□ 0.36
ATXN2-227ENST00000616825 LOC730098B7Z3J9 87 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 DHPSP49366 369 aaPredicted RBP17.27■□□□□ 0.36
ATXN2-227ENST00000616825 SLC25A11Q02978 314 aaKnown RBP17.27■□□□□ 0.36
ATXN2-227ENST00000616825 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.363e-7■■□□□ 11.4
ATXN2-227ENST00000616825 GFOD2Q3B7J2 385 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 RBM20Q5T481 1227 aaKnown RBP17.27■□□□□ 0.36
ATXN2-227ENST00000616825 NAT14Q8WUY8 206 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 SLC25A36Q96CQ1 311 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 KXD1Q9BQD3 176 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 MGME1Q9BQP7 344 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 GORASP1Q9BQQ3 440 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 EBF2Q9HAK2 575 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 CFAP20Q9Y6A4 193 aaKnown RBP17.27■□□□□ 0.36
ATXN2-227ENST00000616825 ZNF726A6NNF4 738 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 TNFP01375 233 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 H1F0P07305 194 aaKnown RBP17.27■□□□□ 0.36
ATXN2-227ENST00000616825 HOXB2P14652 356 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 GSTM3P21266 225 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 CDK6Q00534 326 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 MS4A13Q5J8X5 152 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 STX12Q86Y82 276 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 SHDQ96IW2 340 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 GAL3ST1Q99999 423 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 SP140LQ9H930 580 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 ETAA1Q9NY74 926 aa17.27■□□□□ 0.36
ATXN2-227ENST00000616825 SIRPGQ9P1W8 387 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms