RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	BEND7	Q8N7W2	519 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	NETO1	Q8TDF5	533 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RNF170	Q96K19	258 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	MKRN2	Q9H000	416 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	VNN3	Q9NY84	501 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TAS2R9	Q9NYW1	312 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	ELOVL7	A1L3X0	281 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	C2orf81	A6NN90	581 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RECQL5	O94762	991 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	PRKACB	P22694	351 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TIE1	P35590	1138 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	SLC15A1	P46059	708 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TARDBP	Q13148	414 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TBCE	Q15813	527 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	GNAS	Q5JWF2	1037 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	CCDC190	Q86UF4	302 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	NOXA1	Q86UR1	476 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	FAM20C	Q8IXL6	584 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RPL3L	Q92901	407 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	MTFMT	Q96DP5	389 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	MYOC	Q99972	504 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	CINP	Q9BW66	212 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	REXO4	Q9GZR2	422 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RPRD1B	Q9NQG5	326 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	ACOXL	Q9NUZ1	547 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RNF6	Q9Y252	685 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TDRD15	B5MCY1	1934 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	GBF1	Q92538	1859 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	POLR1C	O15160	346 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	SHOX	O15266	292 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	FAM20B	O75063	409 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	FADS2	O95864	444 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	SERPINA1	P01009	418 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	C1QC	P02747	245 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RPLP0	P05388	317 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TACR2	P21452	398 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	SLC6A4	P31645	630 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RACK1	P63244	317 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	TAF1A	Q15573	450 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	SNAP47	Q5SQN1	464 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	RAVER1	Q8IY67	606 aa	Known RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	FAM109A	Q8N4B1	249 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	CHCHD4	Q8N4Q1	142 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.89	□□□□□ -0.35
STRA6-222	ENST00000616000	ADPRHL2	Q9NX46	363 aa		12.89	□□□□□ -0.35
STRA6-222	ENST00000616000		A0A0U1RQF3	1178 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	TEX51	A0A1B0GUA7	166 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	SEMA3D	O95025	777 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	CYP2A7	P20853	494 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	SOX6	P35712	828 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	NRIP1	P48552	1158 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	AP2S1	P53680	142 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	RPS24	P62847	133 aa	Known RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	SUZ12	Q15022	739 aa	Known RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	ZNF438	Q7Z4V0	828 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	GPR149	Q86SP6	731 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	ANKRD46	Q86W74	232 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	LIX1	Q8N485	282 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	MGME1	Q9BQP7	344 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	FBXO44	Q9H4M3	255 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	DCAF13	Q9NV06	445 aa	Known RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	ELOVL2	Q9NXB9	296 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	NDRG4	Q9ULP0	352 aa	Known RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	CCL27	Q9Y4X3	112 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	ZSCAN5B	A6NJL1	495 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	DSCR3	O14972	297 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	INSIG1	O15503	277 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	SEC22B	O75396	215 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	PRAMEF12	O95522	483 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	MYCLP1	P12525	358 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	LPO	P22079	712 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	CA5A	P35218	305 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	ARHGDIA	P52565	204 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	YBEY	P58557	167 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	SMN1	Q16637	294 aa	Known RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	MORN1	Q5T089	497 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	MLIP	Q5VWP3	458 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	FAAH2	Q6GMR7	532 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	MAMSTR	Q6ZN01	415 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	SLC51B	Q86UW2	128 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	LSMEM1	Q8N8F7	131 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	PHOX2B	Q99453	314 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	APOL5	Q9BWW9	433 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	RIBC2	Q9H4K1	309 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	PRDM8	Q9NQV8	689 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	GMPPB	Q9Y5P6	360 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000	GREB1	Q4ZG55	1949 aa		12.88	□□□□□ -0.35
STRA6-222	ENST00000616000		A0A075B6Q4	140 aa		12.87	□□□□□ -0.35
STRA6-222	ENST00000616000	STX7	O15400	261 aa	Known RBP	12.87	□□□□□ -0.35
STRA6-222	ENST00000616000	TEX28	O15482	410 aa		12.87	□□□□□ -0.35
STRA6-222	ENST00000616000	ZNF623	O75123	536 aa		12.87	□□□□□ -0.35
STRA6-222	ENST00000616000	CREG1	O75629	220 aa		12.87	□□□□□ -0.35
STRA6-222	ENST00000616000	DIRAS1	O95057	198 aa		12.87	□□□□□ -0.35
STRA6-222	ENST00000616000	TYMP	P19971	482 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms