RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 PRAMEF13Q5VWM6 474 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 RP1L1Q8IWN7 2480 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PRORSD1PA6NEY8 169 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 QSOX1O00391 747 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 RARAP10276 462 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 GRIA2P42262 883 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 AQP4P55087 323 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 MTURNQ8N3F0 131 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF559Q9BR84 538 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PRKXP51817 358 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 CARNMT1Q8N4J0 409 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SEZ6LQ9BYH1 1024 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 MAT2BQ9NZL9 334 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 POLLQ9UGP5 575 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 VSTM1Q6UX27 236 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 OR4K17Q8NGC6 315 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SLC38A1Q9H2H9 487 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SLC2A9Q9NRM0 540 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SEMA3GQ9NS98 782 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PCDHB5Q9Y5E4 795 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 H3BNH8 94 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF136P52737 540 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ACSM2AQ08AH3 577 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ATXN7L3Q14CW9 347 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ACSM2BQ68CK6 577 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 TRMOQ9BU70 441 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 LHX5Q9H2C1 402 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 STUB1Q9UNE7 303 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 C10orf71Q711Q0 1435 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 UBE2Q2LH0YL09 131 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ADAMDEC1O15204 470 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 KIAA2026Q5HYC2 2103 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF697Q5TEC3 545 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ANKRD54Q6NXT1 300 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PTF1AQ7RTS3 328 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 GPR149Q86SP6 731 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 C2orf69Q8N8R5 385 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PORCNQ9H237 461 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ABCB8Q9NUT2 735 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 NCDNQ9UBB6 729 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PRRC2BQ5JSZ5 2229 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 QPCTQ16769 361 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 KCNMB4Q86W47 210 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 OR4A15Q8NGL6 344 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TM9SF4Q92544 642 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 MFSD14AQ96MC6 490 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 IL22Q9GZX6 179 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 MMP27Q9H306 513 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 DPEP2Q9H4A9 486 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 RPL36Q9Y3U8 105 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SLC9A3R1O14745 358 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 RFPL3O75679 317 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF404Q494X3 552 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ELP2Q6IA86 826 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 RFWD3Q6PCD5 774 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TRIM46Q7Z4K8 759 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ANGPTL6Q8NI99 470 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 H2AFB2P0C5Z0 115 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 JAM2P57087 298 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 MAD2L1BPQ15013 274 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TCEAL1Q15170 157 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 FAM153CQ494X1 144 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SPATS1Q496A3 300 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 LRRC57Q8N9N7 239 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 KCNN1Q92952 543 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 RIPOR3Q96MK2 946 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TM9SF2Q99805 663 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SLC39A8Q9C0K1 460 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ATG5Q9H1Y0 275 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 A8MUI8 341 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 HDCP19113 662 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SLC7A2P52569 658 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 UGT8Q16880 541 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 GOLGA7BQ2TAP0 167 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 EMC10Q5UCC4 262 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 EFCAB12Q6NXP0 572 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 HDAC10Q969S8 669 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 MRPL57Q9BQC6 102 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 NTN4Q9HB63 628 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TAS2R10Q9NYW0 307 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PCDHGB5Q9Y5G0 923 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TLL2Q9Y6L7 1015 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 A0A096LPK6 155 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 KIAA0355O15063 1070 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 XRCC1P18887 633 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF143P52747 638 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SLC22A25Q6T423 547 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SPATA2LQ8IUW3 424 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 LRFN5Q96NI6 719 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TMPRSS5Q9H3S3 457 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms