RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 AASDHQ4L235 1098 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 LY6G5CQ5SRR4 150 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SHQ1Q6PI26 577 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 C5orf46Q6UWT4 87 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 VITQ6UXI7 678 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 HORMAD1Q86X24 394 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 APCDD1Q8J025 514 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 RBM15BQ8NDT2 890 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 TRPV3Q8NET8 790 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 UTP15Q8TED0 518 aaKnown RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 MRGPRX3Q96LB0 322 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 LRRC3BQ96PB8 259 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 CPNE1Q99829 537 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 TMEM120AQ9BXJ8 343 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 TTYH1Q9H313 450 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 RANBP3Q9H6Z4 567 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 CERS4Q9HA82 394 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PLSCR3Q9NRY6 295 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 ACOXLQ9NUZ1 547 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 SPATA6Q9NWH7 488 aaPredicted RBP8.59□□□□□ -1.03
VPS11-206ENST00000614944 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 DUSP12Q9UNI6 340 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 PSAT1Q9Y617 370 aa8.59□□□□□ -1.03
VPS11-206ENST00000614944 I3L521 148 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 PPM1BO75688 479 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 GSNP06396 782 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ENO3P13929 434 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 HK1P19367 917 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 GABRB3P28472 473 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 GRIA1P42261 906 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 MEOX2P50222 304 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 BAMBIQ13145 260 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 IHHQ14623 411 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 TAF1AQ15573 450 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 CYP27C1Q4G0S4 372 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SIRPB2Q5JXA9 342 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CFAP77Q6ZQR2 320 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ZC3H7AQ8IWR0 971 aaKnown RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 MPP5Q8N3R9 675 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 C12orf76Q8N812 135 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 OR2AP1Q8NGE2 309 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SPATA22Q8NHS9 363 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CERS2Q96G23 380 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 FOPNLQ96NB1 174 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 NFKBIL1Q9UBC1 381 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 PLA2G4CQ9UP65 541 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 HRH3Q9Y5N1 445 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 DOCK8Q8NF50 2099 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 A0A0G2JPF8 293 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 OR6C74A6NCV1 312 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 FAM47DPA6NHR8 397 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 HNRNPCL3B7ZW38 293 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CBX4O00257 560 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 AVILO75366 819 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 MT-CYBP00156 380 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 HNRNPCL4P0DMR1 293 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SSTR1P30872 391 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ARCN1P48444 511 aaKnown RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 DGKQP52824 942 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 FLI1Q01543 452 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 CLCQ05315 142 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 TSTD2Q5T7W7 516 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 C22orf39Q6P5X5 142 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SUSD1Q6UWL2 747 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 TRABD2AQ86V40 505 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 AMIGO1Q86WK6 493 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 OR6F1Q8NGZ6 308 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 AGR3Q8TD06 166 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 STYXQ8WUJ0 223 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 HTRA1Q92743 480 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 DNASE1L2Q92874 299 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ZNF566Q969W8 418 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 PAFAH2Q99487 392 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CEP41Q9BYV8 373 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SMG9Q9H0W8 520 aaKnown RBP8.58□□□□□ -1.04
VPS11-206ENST00000614944 NANOGQ9H9S0 305 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CD207Q9UJ71 328 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ERVW-1Q9UQF0 538 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 PMS2P1A4D2B8 440 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 H3BMM5 538 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 PGLSO95336 258 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 HNRNPLP14866 589 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS11-206ENST00000614944 RHOAP61586 193 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 IFITM3Q01628 133 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SLC18A2Q05940 514 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 GTDC1Q4AE62 458 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CARD16Q5EG05 197 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CDKL4Q5MAI5 379 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ZNF697Q5TEC3 545 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 ZDHHC20Q5W0Z9 365 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SH2D5Q6ZV89 423 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 SPATC1Q76KD6 591 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 OTOAQ7RTW8 1153 aa8.58□□□□□ -1.04
VPS11-206ENST00000614944 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms