RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 PSMB9P28065 219 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 UGT2B10P36537 528 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 CAP1Q01518 475 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 ABHD18Q0P651 414 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 NFE2Q16621 373 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 UGT8Q16880 541 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 PROX2Q3B8N5 592 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 ATAD3BQ5T9A4 648 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 OR4F3Q6IEY1 312 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 FAM151BQ6UXP7 276 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 CCDC81Q6ZN84 652 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 ARMC8Q8IUR7 673 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 DENND1CQ8IV53 801 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 ZNF540Q8NDQ6 660 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 GIPC2Q8TF65 315 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 CHAC2Q8WUX2 184 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 PROX1Q92786 737 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 HRASLS5Q96KN8 279 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 AASDHPPTQ9NRN7 309 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 OLA1Q9NTK5 396 aaKnown RBP7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 TRMT13Q9NUP7 481 aaKnown RBP7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 GPATCH2Q9NW75 528 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 FBXL12Q9NXK8 326 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 PDP1Q9P0J1 537 aaPredicted RBP7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 VPS9D1Q9Y2B5 631 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 UGT2A1Q9Y4X1 527 aa7.23□□□□□ -1.25
PPARGC1A-217ENST00000613098 ILVBLA1L0T0 632 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 AGAP5A6NIR3 686 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 AGAP14A8MT82 685 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 EFCAB9A8MZ26 197 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 M0R3G1 203 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 RAD51BO15315 384 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 RGS10O43665 173 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GREM1O60565 184 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 E2F6O75461 281 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 ZNF821O75541 412 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 CYBAP13498 195 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 CD22P20273 847 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GADD45AP24522 165 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GRK3P35626 688 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GSSP48637 474 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PXNP49023 591 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 HNRNPFP52597 415 aaKnown RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 TPD52P55327 224 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 NKX3-2P78367 333 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 NPRL3Q12980 569 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 NFATC2Q13469 925 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 SF1Q15637 639 aaKnown RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 FAM26DQ5JW98 314 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 ATXN7L2Q5T6C5 722 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 CBLL1Q75N03 491 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GDPD3Q7L5L3 318 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PSMA8Q8TAA3 256 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 NCLNQ969V3 563 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 EFHD2Q96C19 240 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 FAM120BQ96EK7 910 aaKnown RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 TSSK3Q96PN8 268 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 RSPO3Q9BXY4 272 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GABARAPL3Q9BY60 117 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 ABCG8Q9H221 673 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 CWH43Q9H720 699 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 SP140LQ9H930 580 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 RDH14Q9HBH5 336 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 RLIMQ9NVW2 624 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 KLHL3Q9UH77 587 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PSORS1C1Q9UIG5 152 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PCDHB9Q9Y5E1 797 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PCDHGA3Q9Y5H0 932 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GMPPBQ9Y5P6 360 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GFRA2O00451 464 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PFDN6O15212 129 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 COCHO43405 550 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 STC2O76061 302 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 LRATO95237 230 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 SEC24AO95486 1093 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PRAMEF1O95521 474 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 FPR1P21462 350 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 DNAJA1P31689 397 aaKnown RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GKP32189 559 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 KDELR2P33947 212 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 ARL1P40616 181 aaPredicted RBP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 NR4A2P43354 598 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 DUSP4Q13115 394 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 IRF3Q14653 427 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 CPSF6Q16630 551 aaKnown RBP eCLIP7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 VMACQ2NL98 169 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 COLEC12Q5KU26 742 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 RTP2Q5QGT7 225 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 MLIPQ5VWP3 458 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 KIAA1614Q5VZ46 1190 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 C19orf48Q6RUI8 117 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 C17orf99Q6UX52 265 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 AHSA2Q719I0 299 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 SPATC1Q76KD6 591 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 LRRC8DQ7L1W4 858 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 C16orf59Q7L2K0 433 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 SYNPOQ8N3V7 929 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 PARP16Q8N5Y8 322 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 GGHQ92820 318 aa7.22□□□□□ -1.25
PPARGC1A-217ENST00000613098 SLC38A4Q969I6 547 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms