RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 VARSP26640 1264 aaKnown RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 SOX8P57073 446 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 FOXL2P58012 376 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 CTBP1Q13363 440 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 NKG7Q16617 165 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 SLC6A19Q695T7 634 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 FRMPD2BQ6IN97 320 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 PRMT9Q6P2P2 845 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 CLEC18BQ6UXF7 455 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 PPIL6Q8IXY8 311 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 RBMXL3Q8N7X1 1067 aaKnown RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 CLEC18CQ8NCF0 446 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 FBXO15Q8NCQ5 510 aaPredicted RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 VPS50Q96JG6 964 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 PKP4Q99569 1192 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 ZFYVE21Q9BQ24 234 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 DPH7Q9BTV6 452 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 MFRPQ9BY79 579 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 MRPS30Q9NP92 439 aaKnown RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 UTP6Q9NYH9 597 aaKnown RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 ZC3H7BQ9UGR2 993 aaKnown RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 CDC23Q9UJX2 597 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 MAP4K5Q9Y4K4 846 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 CCDC88CQ9P219 2028 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 EIF2S1P05198 315 aaKnown RBP16.59■□□□□ 0.25
PRKN-209ENST00000612485 MPC1LP0DKB6 136 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 SLC1A2P43004 574 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 OR1D4P47884 311 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 PNLIPRP1P54315 467 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 AIMP2Q13155 320 aaKnown RBP16.59■□□□□ 0.25
PRKN-209ENST00000612485 TSTA3Q13630 321 aaPredicted RBP16.59■□□□□ 0.25
PRKN-209ENST00000612485 MUM1Q2TAK8 710 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 SUSD1Q6UWL2 747 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 METTL27Q8N6F8 245 aaPredicted RBP16.59■□□□□ 0.25
PRKN-209ENST00000612485 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRKN-209ENST00000612485 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.59■□□□□ 0.25
PRKN-209ENST00000612485 TM9SF4Q92544 642 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 INPP5DQ92835 1189 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 SIGLEC10Q96LC7 697 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 SPSB2Q99619 263 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 ZNF304Q9HCX3 659 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 SLC6A20Q9NP91 592 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 DHRS7Q9Y394 339 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 COL12A1Q99715 3063 aa16.59■□□□□ 0.25
PRKN-209ENST00000612485 LOC105369274A0A096LPK9 316 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 LOC102723532A0A0G2JNH3 316 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 ZBTB14O43829 449 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 PRDX1Q06830 199 aaKnown RBP16.58■□□□□ 0.24
PRKN-209ENST00000612485 CUL1Q13616 776 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 INPP5JQ15735 1006 aaPredicted RBP16.58■□□□□ 0.24
PRKN-209ENST00000612485 RNASEH2BQ5TBB1 312 aaKnown RBP16.58■□□□□ 0.24
PRKN-209ENST00000612485 FBXO42Q6P3S6 717 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 ZNF549Q6P9A3 640 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 OR4N4Q8N0Y3 316 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.24
PRKN-209ENST00000612485 Q8NA96 180 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 GIMAP7Q8NHV1 300 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 GABPB2Q8TAK5 448 aaPredicted RBP16.58■□□□□ 0.24
PRKN-209ENST00000612485 ASB11Q8WXH4 323 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 COL26A1Q96A83 441 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 PLCD4Q9BRC7 762 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 SOX17Q9H6I2 414 aaPredicted RBP16.58■□□□□ 0.24
PRKN-209ENST00000612485 ZNF552Q9H707 407 aaPredicted RBP16.58■□□□□ 0.24
PRKN-209ENST00000612485 SEMA3GQ9NS98 782 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 LUZP4Q9P127 313 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 CTSFQ9UBX1 484 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 TAC3Q9UHF0 121 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 FBXL4Q9UKA2 621 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 FBXO5Q9UKT4 447 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 SNX12Q9UMY4 172 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 MED16Q9Y2X0 877 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 MAU2Q9Y6X3 613 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 ANKRD12Q6UB98 2062 aa16.58■□□□□ 0.24
PRKN-209ENST00000612485 PTPN13Q12923 2485 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 VSTM2BA6NLU5 285 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 H0YGG7 62 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 EIF3FO00303 357 aaPredicted RBP16.57■□□□□ 0.24
PRKN-209ENST00000612485 NRP2O60462 931 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 SLC16A8O95907 504 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 SYF2O95926 243 aaKnown RBP16.57■□□□□ 0.24
PRKN-209ENST00000612485 F7P08709 466 aaPredicted RBP16.57■□□□□ 0.24
PRKN-209ENST00000612485 PGAM1P18669 254 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 ITGA3P26006 1051 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 CARSP49589 748 aaKnown RBP16.57■□□□□ 0.24
PRKN-209ENST00000612485 EMP3P54852 163 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 ARF3P61204 181 aaPredicted RBP16.57■□□□□ 0.24
PRKN-209ENST00000612485 YBX1P67809 324 aaKnown RBP16.57■□□□□ 0.24
PRKN-209ENST00000612485 ABATP80404 500 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 MPP1Q00013 466 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 OCA2Q04671 838 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 PTK6Q13882 451 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 RBBP7Q16576 425 aa16.57■□□□□ 0.24
PRKN-209ENST00000612485 HSP90AA5PQ58FG0 334 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 429.6 ms