RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 SLC26A1Q9H2B4 701 aa17.44■□□□□ 0.38
VCX3A-203ENST00000612369 WDR54Q9H977 334 aa17.44■□□□□ 0.38
VCX3A-203ENST00000612369 MRPS30Q9NP92 439 aaKnown RBP17.44■□□□□ 0.38
VCX3A-203ENST00000612369 MYO18BQ8IUG5 2567 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 MED13Q9UHV7 2174 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 PEX12O00623 359 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 KLHL41O60662 606 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 SLC16A8O95907 504 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 OTX2P32243 289 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 PAFAH1B1P43034 410 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 VSX2P58304 361 aaPredicted RBP17.43■□□□□ 0.38
VCX3A-203ENST00000612369 MPP1Q00013 466 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 DR1Q01658 176 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 RELAQ04206 551 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 PRDX1Q06830 199 aaKnown RBP17.43■□□□□ 0.38
VCX3A-203ENST00000612369 CUL1Q13616 776 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 ATP1A4Q13733 1029 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 BBS9Q3SYG4 887 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 MSS51Q4VC12 460 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 WASHC2DQ5SRD0 308 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 OVCH1Q7RTY7 1134 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 GALNT7Q86SF2 657 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 MRGPREQ86SM8 312 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 KLHL7Q8IXQ5 586 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 ZNF480Q8WV37 535 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 LRRC39Q96DD0 335 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 ACAT2Q9BWD1 397 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 SLC22A11Q9NSA0 550 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 TAS2R13Q9NYV9 303 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 TRMT6Q9UJA5 497 aaKnown RBP17.43■□□□□ 0.38
VCX3A-203ENST00000612369 ZNF451Q9Y4E5 1061 aa17.43■□□□□ 0.38
VCX3A-203ENST00000612369 A0A0J9YVX5 310 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 E7ENX8 843 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 CNOT3O75175 753 aaKnown RBP17.42■□□□□ 0.38
VCX3A-203ENST00000612369 ZIC2O95409 532 aaPredicted RBP17.42■□□□□ 0.38
VCX3A-203ENST00000612369 PDGFAP04085 211 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 F7P08709 466 aaPredicted RBP17.42■□□□□ 0.38
VCX3A-203ENST00000612369 ERVK-10P10266 1014 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 MCM3P25205 808 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 RGS4P49798 205 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 EMP3P54852 163 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 ABATP80404 500 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 TAP2Q03519 686 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 SLC9A5Q14940 896 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 ICE2Q659A1 982 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 FBXO42Q6P3S6 717 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 SUSD1Q6UWL2 747 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 CERS2Q96G23 380 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 PLCD4Q9BRC7 762 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 NXT1Q9UKK6 140 aaKnown RBP17.42■□□□□ 0.38
VCX3A-203ENST00000612369 ANKRD12Q6UB98 2062 aa17.42■□□□□ 0.38
VCX3A-203ENST00000612369 UBR5O95071 2799 aaPredicted RBP17.41■□□□□ 0.38
VCX3A-203ENST00000612369 HYKKA2RU49 373 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 NDC80O14777 642 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 ITGAXP20702 1163 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 FOXK1P85037 733 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 FRMPD2BQ6IN97 320 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 HIBCHQ6NVY1 386 aaPredicted RBP17.41■□□□□ 0.38
VCX3A-203ENST00000612369 PRMT9Q6P2P2 845 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 UBE2R2Q712K3 238 aaPredicted RBP17.41■□□□□ 0.38
VCX3A-203ENST00000612369 CPNE9Q8IYJ1 553 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 CLEC1AQ8NC01 280 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 SLC6A20Q9NP91 592 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 GPR83Q9NYM4 423 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 ZC3H7BQ9UGR2 993 aaKnown RBP17.41■□□□□ 0.38
VCX3A-203ENST00000612369 TAC3Q9UHF0 121 aa17.41■□□□□ 0.38
VCX3A-203ENST00000612369 CCDC88CQ9P219 2028 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 LOC105369274A0A096LPK9 316 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 LOC102723532A0A0G2JNH3 316 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 BANF1O75531 89 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 SYF2O95926 243 aaKnown RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 AHSGP02765 367 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 C8GP07360 202 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 UMODP07911 640 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 CARSP49589 748 aaKnown RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 SOX8P57073 446 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 SP140Q13342 867 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 TSTA3Q13630 321 aaPredicted RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 FRG1Q14331 258 aaKnown RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 NKG7Q16617 165 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 HIF1AQ16665 826 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 MUM1Q2TAK8 710 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 DCAF10Q5QP82 559 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 ZNF425Q6IV72 752 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 PIWIL4Q7Z3Z4 852 aaKnown RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 PAQR7Q86WK9 346 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 IGDCC3Q8IVU1 814 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 LRRC56Q8IYG6 542 aaPredicted RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 OR4N4Q8N0Y3 316 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 FDCSPQ8NFU4 85 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 MCOLN3Q8TDD5 553 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 SNF8Q96H20 258 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 CCDC138Q96M89 665 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 ZNF304Q9HCX3 659 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 P4HTMQ9NXG6 502 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 C5AR2Q9P296 337 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 CORO1CQ9ULV4 474 aaPredicted RBP17.4■□□□□ 0.38
VCX3A-203ENST00000612369 PYCARDQ9ULZ3 195 aa17.4■□□□□ 0.38
VCX3A-203ENST00000612369 TEX264Q9Y6I9 313 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms