RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 EDN3P14138 238 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 PSMA3P25788 255 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 ZNF75DP51815 510 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 KCNK10P57789 538 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 SRSF11Q05519 484 aaKnown RBP12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 MFAP5Q13361 173 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 VWA2Q5GFL6 755 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 YOD1Q5VVQ6 348 aaPredicted RBP12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 B3GNTL1Q67FW5 361 aaPredicted RBP12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 OR4N4Q8N0Y3 316 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 OR2L3Q8NG85 312 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 NACC2Q96BF6 587 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 FOPNLQ96NB1 174 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 BARD1Q99728 777 aaKnown RBP12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 SLC26A1Q9H2B4 701 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 CHRAC1Q9NRG0 131 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 HEATR5BQ9P2D3 2071 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 CAPN6Q9Y6Q1 641 aa12.75□□□□□ -0.37
HMGB1P24-201ENST00000611897 PCNX1Q96RV3 2341 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 NSG1A0A0A6YYJ2 146 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 DYTNA2CJ06 578 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 JRKO75564 520 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 SLCO2B1O94956 709 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 C1orf105O95561 183 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 ZSCAN5DPP0CG00 497 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 CARSP49589 748 aaKnown RBP12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 TTPAP49638 278 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 TERF1P54274 439 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 YBX1P67809 324 aaKnown RBP12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 ACVR1Q04771 509 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 ZRSR2Q15696 482 aaKnown RBP12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 MUM1Q2TAK8 710 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 IGFL2Q6UWQ7 119 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 BCORP1Q8N888 145 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 BRIX1Q8TDN6 353 aaKnown RBP12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 MRFAP1L1Q96HT8 127 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 ZFYVE21Q9BQ24 234 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 DPH7Q9BTV6 452 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 TRPC4Q9UBN4 977 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 SH3BGRL2Q9UJC5 107 aa12.74□□□□□ -0.37
HMGB1P24-201ENST00000611897 VSTM2BA6NLU5 285 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 GOLGA8KD6RF30 607 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 HNRNPRO43390 633 aaKnown RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 NIPSNAP2O75323 286 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 USP1O94782 785 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 SUN1O94901 812 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 CELA2AP08217 269 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 CXCR2P25025 360 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 CMPK1P30085 196 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 FASTKQ14296 549 aaKnown RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 OASLQ15646 514 aaKnown RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 KCTD19Q17RG1 926 aaPredicted RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 PRMT9Q6P2P2 845 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 SUSD1Q6UWL2 747 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 CES3Q6UWW8 571 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 ADCK2Q7Z695 626 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 LAPTM4BQ86VI4 370 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 ZUFSPQ96AP4 578 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 C10orf90Q96M02 699 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 ZNF285Q96NJ3 590 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 BAG1Q99933 345 aaPredicted RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 UNKQ9C0B0 810 aaKnown RBP12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 IL1RAPL1Q9NZN1 696 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 PAK5Q9P286 719 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 RIMKLBQ9ULI2 386 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 MRFAP1Q9Y605 127 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
HMGB1P24-201ENST00000611897 TRGV8A0A0C4DH27 118 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 FITM1A5D6W6 292 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 IDSB3KWA1 339 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 TARM1B6A8C7 271 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 H0YGG7 62 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 PRICKLE3O43900 615 aaPredicted RBP12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 SRPX2O60687 465 aaPredicted RBP12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 VPS26AO75436 327 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 FKBP9O95302 570 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 ONECUT2O95948 504 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 STATHP02808 62 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 HEXBP07686 556 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 PRR35P0CG20 571 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 COX6A1P12074 109 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 PRF1P14222 555 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 NMBRP28336 390 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 FMO4P31512 558 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 RPA3P35244 121 aaPredicted RBP12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 CCNFP41002 786 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 EMP2P54851 167 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 ARF3P61204 181 aaPredicted RBP12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 PCID2Q5JVF3 399 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 CTSL3PQ5NE16 218 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 GFRALQ6UXV0 394 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 RNF44Q7L0R7 432 aa12.72□□□□□ -0.37
HMGB1P24-201ENST00000611897 TICAM1Q8IUC6 712 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms