RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ACACBO00763 2458 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 FAM149AA5PLN7 773 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 HDAC3O15379 428 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 NPHS1O60500 1241 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 DIAPH2O60879 1101 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 NIPSNAP2O75323 286 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 CSO75390 466 aaKnown RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 UBXN7O94888 489 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 CHRNGP07510 517 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 TPBGLP0DKB5 382 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 AMD1P17707 334 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 SPINK2P20155 84 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 ACADLP28330 430 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 PRDX6P30041 224 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 CCKBRP32239 447 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 PGM1P36871 562 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 GLRBP48167 497 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 PPM1FP49593 454 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 RPL14P50914 215 aaKnown RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 NAGLUP54802 743 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 SLC12A2P55011 1212 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 INHBCP55103 352 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 CLDN6P56747 220 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 PRKAA1Q13131 559 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 GPR18Q14330 331 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 FAM83EQ2M2I3 478 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 SLC9B1Q4ZJI4 515 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 ARL13AQ5H913 290 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 TECRLQ5HYJ1 363 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 RBM20Q5T481 1227 aaKnown RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 HECTD2Q5U5R9 776 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 NKAIN2Q5VXU1 208 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 TMEM71Q6P5X7 295 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 KLHL35Q6PF15 583 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 WDR74Q6RFH5 385 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 USP53Q70EK8 1073 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 TBC1D21Q8IYX1 336 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 OR4D9Q8NGE8 314 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 FBXO27Q8NI29 283 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 FERD3LQ96RJ6 166 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 AARSD1Q9BTE6 412 aaKnown RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 KIR3DX1Q9H7L2 352 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 NPDC1Q9NQX5 325 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 VTI1BQ9UEU0 232 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 ATXN7L1Q9ULK2 861 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 CORO1CQ9ULV4 474 aaPredicted RBP8.56□□□□□ -1.04
SMAD4-217ENST00000611848 ASF1AQ9Y294 204 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 VWA7Q9Y334 891 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 ENTPD2Q9Y5L3 495 aa8.56□□□□□ -1.04
SMAD4-217ENST00000611848 CHD8Q9HCK8 2581 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CASC3O15234 703 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 KDM1AO60341 852 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 ENTPD5O75356 428 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 RPN2P04844 631 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PROS1P07225 676 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 RBP1P09455 135 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 LTA4HP09960 611 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 TFEBP19484 476 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CD9P21926 228 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 MPSTP25325 297 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 GCKP35557 465 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CPA2P48052 419 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PDX1P52945 283 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 ZFP36L1Q07352 338 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 EIF3IQ13347 325 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 TRA2AQ13595 282 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 NAA25Q14CX7 972 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 ACAP2Q15057 778 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PLCL1Q15111 1095 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 TTLL9Q3SXZ7 439 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CFAP157Q5JU67 520 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 UGT3A1Q6NUS8 523 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 DUS1LQ6P1R4 473 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 ZNF549Q6P9A3 640 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PIWIL4Q7Z3Z4 852 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PLXDC1Q8IUK5 500 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 SPATA6LQ8N4H0 392 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 ZBTB2Q8N680 514 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 NCSTNQ92542 709 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CMTM5Q96DZ9 223 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CCDC126Q96EE4 140 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 CNDP1Q96KN2 507 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 FOPNLQ96NB1 174 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 ANKRD27Q96NW4 1050 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 NDNQ99608 321 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 NUDT22Q9BRQ3 303 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 TACO1Q9BSH4 297 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 STRADBQ9C0K7 418 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 NRSN2Q9GZP1 204 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 RAB33BQ9H082 229 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 TFB2MQ9H5Q4 396 aaKnown RBP8.55□□□□□ -1.04
SMAD4-217ENST00000611848 DCLRE1BQ9H816 532 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 RDH14Q9HBH5 336 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 PDP2Q9P2J9 529 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 EPHA6Q9UF33 1036 aa8.55□□□□□ -1.04
SMAD4-217ENST00000611848 POLG2Q9UHN1 485 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms