RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	CTH	P32929	405 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	CBS	P35520	551 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	NSG1	P42857	185 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	OR4D2	P58180	307 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PHEX	P78562	749 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	TUBA3C	Q13748	450 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	ACOX1	Q15067	660 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZNF284	Q2VY69	593 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	GPR107	Q5VW38	600 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	GALNT13	Q8IUC8	556 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PLEKHA8	Q96JA3	519 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	FAM129B	Q96TA1	746 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZBTB18	Q99592	522 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	CGREF1	Q99674	301 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	NTMT1	Q9BV86	223 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	KCNK12	Q9HB15	430 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	KCTD5	Q9NXV2	234 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZDHHC3	Q9NYG2	299 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	KLHL42	Q9P2K6	505 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	MAGEL2	Q9UJ55	1249 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	PAIP2B	Q9ULR5	123 aa	Known RBP	13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	USP22	Q9UPT9	525 aa		13.5	□□□□□ -0.25
COPS7B-223	ENST00000611614	EBLN1	P0CF75	366 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	TIE1	P35590	1138 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	MMP12	P39900	470 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	WAS	P42768	502 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	DGKQ	P52824	942 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	SEC13	P55735	322 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	RPL38	P63173	70 aa	Known RBP	13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	STARD3	Q14849	445 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	KIAA0040	Q15053	153 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	KCTD8	Q6ZWB6	473 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	RALGPS2	Q86X27	583 aa	Predicted RBP	13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	PPM1M	Q96MI6	270 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	COPS8	Q99627	209 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	TRPV5	Q9NQA5	729 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	CD84	Q9UIB8	345 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	B3GNT3	Q9Y2A9	372 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	PSMD11	O00231	422 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	EI24	O14681	340 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	FFAR3	O14843	346 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	GPR42	O15529	346 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	MBTPS2	O43462	519 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	ULK1	O75385	1050 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	ADRB3	P13945	408 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	SOX11	P35716	441 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	DCDC1	P59894	354 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	ADARB1	P78563	741 aa	Known RBP	13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	SELPLG	Q14242	412 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	CYBRD1	Q53TN4	286 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	GLYAT	Q6IB77	296 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZNF773	Q6PK81	442 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614		Q6ZVL8	140 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	ERN2	Q76MJ5	926 aa	Known RBP	13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	HSD11B1L	Q7Z5J1	315 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	NRBF2	Q96F24	287 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	NSMCE2	Q96MF7	247 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	PIF1	Q9H611	641 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	KL	Q9UEF7	1012 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	PIAS3	Q9Y6X2	628 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614	SZT2	Q5T011	3432 aa		13.49	□□□□□ -0.25
COPS7B-223	ENST00000611614		H0Y858	1186 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	MANBA	O00462	879 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	COQ9	O75208	318 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	SEC24D	O94855	1032 aa	Predicted RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	EPB42	P16452	691 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	PIK3CG	P48736	1102 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ATP13A5	Q4VNC0	1218 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	CDKL4	Q5MAI5	379 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	TMEM26	Q6ZUK4	368 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	TRIM46	Q7Z4K8	759 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	SLC44A3	Q8N4M1	653 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	OR8J3	Q8NGG0	315 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	OR13F1	Q8NGS4	319 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	NUDT8	Q8WV74	236 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	RAB7B	Q96AH8	199 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ITPKC	Q96DU7	683 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ERLEC1	Q96DZ1	483 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	FBXL20	Q96IG2	436 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	MAGED4	Q96JG8	741 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZSCAN5A	Q9BUG6	496 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	WRAP53	Q9BUR4	548 aa	Known RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	PHF7	Q9BWX1	381 aa	Predicted RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	SLC29A3	Q9BZD2	475 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ASIC5	Q9NY37	505 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	DENND4A	Q7Z401	1863 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	LOC730098	B7Z3J9	87 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	CFAP99	D6REC4	459 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	WNT9A	O14904	365 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	STK16	O75716	305 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	KCNH1	O95259	989 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ANXA5	P08758	320 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	CDH1	P12830	882 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	CCNA2	P20248	432 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	RPL10	P27635	214 aa	Known RBP	13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	AKT1	P31749	480 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	ETV3	P41162	512 aa		13.48	□□□□□ -0.25
COPS7B-223	ENST00000611614	GNPDA1	P46926	289 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms