RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 NEPROQ6NW34 567 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 SHISA6Q6ZSJ9 500 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 CENPUQ71F23 418 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 COX15Q7KZN9 410 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 CILP2Q8IUL8 1156 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 RAB42Q8N4Z0 105 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 ACTRT1Q8TDG2 376 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 FOPNLQ96NB1 174 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 ZNF285Q96NJ3 590 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 SPSB2Q99619 263 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 MIPEPQ99797 713 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 WDR54Q9H977 334 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 SLC6A20Q9NP91 592 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 MRFAP1Q9Y605 127 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 CNTRLQ7Z7A1 2325 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 SDR42E2A6NKP2 422 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 SOCS6O14544 535 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 SRPX2O60687 465 aaPredicted RBP20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 ALOX12BO75342 701 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 ATP5DP30049 168 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 CCNFP41002 786 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 GLRBP48167 497 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 FNTAP49354 379 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 WASHC2DQ5SRD0 308 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 METTL27Q8N6F8 245 aaPredicted RBP20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 GRK7Q8WTQ7 553 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 INPP5DQ92835 1189 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 SLC26A1Q9H2B4 701 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 SOX17Q9H6I2 414 aaPredicted RBP20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 INTS10Q9NVR2 710 aaKnown RBP20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 GALPQ9UBC7 116 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 SNX12Q9UMY4 172 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 COPG1Q9Y678 874 aaKnown RBP20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 MAU2Q9Y6X3 613 aa20.28■□□□□ 0.84
PPFIA3-209ENST00000602783 NBPF19A0A087WUL8 3843 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 GOLGA6L10A0A0M3HER8 536 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 FITM1A5D6W6 292 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 E5RI56 91 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 CBX6O95503 412 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 PKMP14618 531 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 CHRM3P20309 590 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 MAGEA3P43357 314 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 PRAMEF13Q5VWM6 474 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 FRMPD2BQ6IN97 320 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 Q6ZS92 163 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 AGGF1Q8N302 714 aaeCLIP20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 DTWD1Q8N5C7 304 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 NAT8LQ8N9F0 302 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 HMGCLL1Q8TB92 370 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 MAGEC3Q8TD91 643 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 ENAMQ9NRM1 1142 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 TRMT1Q9NXH9 659 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 CTSFQ9UBX1 484 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 ZC3H7BQ9UGR2 993 aaKnown RBP20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 VPS9D1Q9Y2B5 631 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 HS3ST3B1Q9Y662 390 aa20.27■□□□□ 0.84
PPFIA3-209ENST00000602783 NOTCH2Q04721 2471 aa20.27■□□□□ 0.83
PPFIA3-209ENST00000602783 DOCK10Q96BY6 2186 aa20.27■□□□□ 0.83
PPFIA3-209ENST00000602783 A0A0J9YVX5 310 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 ZCWPW2A0A1B0GU75 182 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 MAGEB16A2A368 324 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 CTAGE9A4FU28 777 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 KIF5CO60282 957 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 MATN4O95460 622 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 DDAH2O95865 285 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 THOC5Q13769 683 aaKnown RBP20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 ACSBG2Q5FVE4 666 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 KIRREL2Q6UWL6 708 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 CUZD1Q86UP6 607 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 DENND6AQ8IWF6 608 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 PARP9Q8IXQ6 854 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 OR2L3Q8NG85 312 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 OR2A1Q8NGT9 310 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 FBXO6Q9NRD1 293 aaPredicted RBP20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 SPATA7Q9P0W8 599 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 NXT1Q9UKK6 140 aaKnown RBP20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 MAD1L1Q9Y6D9 718 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 FAM169AQ9Y6X4 670 aa20.26■□□□□ 0.83
PPFIA3-209ENST00000602783 LOC105369274A0A096LPK9 316 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 LOC102723532A0A0G2JNH3 316 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 A0A1W2PPV9 198 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 A1L4Q6 167 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 HYKKA2RU49 373 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 CES2O00748 559 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 NRP2O60462 931 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 USP1O94782 785 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 EIF2S1P05198 315 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 SLC1A2P43004 574 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 CTBP1Q13363 440 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 FASTKQ14296 549 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 PPP1R7Q15435 360 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 RBBP7Q16576 425 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 HIF1AQ16665 826 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 CRB2Q5IJ48 1285 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 IRAK1BP1Q5VVH5 260 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 PPIL6Q8IXY8 311 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 OR4N4Q8N0Y3 316 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 ZNF304Q9HCX3 659 aa20.25■□□□□ 0.83
PPFIA3-209ENST00000602783 SEMA3GQ9NS98 782 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms