RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ABCD2Q9UBJ2 740 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 C8BP07358 591 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 RPS14P62263 151 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 KCT2Q8NC54 265 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ASB12Q8WXK4 309 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF285Q96NJ3 590 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 MRPS30Q9NP92 439 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 MDC1Q14676 2089 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 TRIM64A6NGJ6 449 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 AQP12BA6NM10 295 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PCDH7O60245 1069 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 EPHX1P07099 455 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ANXA8P13928 327 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SPIN4Q56A73 249 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 NIPAL1Q6NVV3 410 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 AQP12AQ8IXF9 295 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 IRGQQ8WZA9 623 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 CREB3L1Q96BA8 519 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM209Q96SK2 561 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 HSPB11Q9Y547 144 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 TRIOBPQ9H2D6 2365 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 MYPNQ86TC9 1320 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 MATN3O15232 486 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PET100P0DJ07 73 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SMSP52788 366 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 FAM189A2Q15884 450 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 GALNT12Q8IXK2 581 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 BRSK1Q8TDC3 778 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 HSPBAP1Q96EW2 488 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 EBF4Q9BQW3 602 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 NOP16Q9Y3C1 178 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 AXIN1O15169 862 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 GSTM3P21266 225 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ERP29P30040 261 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PIK3CBP42338 1070 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PRAMEF19Q5SWL8 479 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF366Q8N895 744 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 CCDC120Q96HB5 630 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 WACQ9BTA9 647 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SLC15A5A6NIM6 579 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 POP4O95707 220 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 VEGFAP15692 232 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 XRCC1P18887 633 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SLC18A2Q05940 514 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ENPP2Q13822 863 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM199Q8N511 208 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 EBF2Q9HAK2 575 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 GOLGA2P5Q9HBQ8 144 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 RNF6Q9Y252 685 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PLEKHA6Q9Y2H5 1048 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PCDHGB2Q9Y5G2 931 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SMAD9O15198 467 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 RPL26P61254 145 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 TSTQ16762 297 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SYT16Q17RD7 645 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ANKDD1AQ495B1 522 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SAMD14Q8IZD0 417 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 VGLL2Q8N8G2 317 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 A0A1B0GVC2 190 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 H1F0P07305 194 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 DCKP27707 260 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 GLUD2P49448 558 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 CDH15P55291 814 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 EEFSECP57772 596 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 MVKQ03426 396 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 GPC2Q8N158 579 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 FBXO15Q8NCQ5 510 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 TMBIM1Q969X1 311 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 MAGEH1Q9H213 219 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ARL5AQ9Y689 179 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF267Q14586 743 aaPredicted RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SLC8B1Q6J4K2 584 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 CHST9Q7L1S5 443 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 DCAKDQ8WVC6 231 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 OXSMQ9NWU1 459 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 P2RX2Q9UBL9 471 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PCDHGB5Q9Y5G0 923 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PIKFYVEQ9Y2I7 2098 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 H7C2Y5 167 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ITGB5P18084 799 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PUS10Q3MIT2 529 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PKP4Q99569 1192 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 SRMSQ9H3Y6 488 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PDZD7Q9H5P4 517 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 ZIM2Q9NZV7 527 aa9.39□□□□□ -0.91
CSMD1-217ENST00000602723 FARSAQ9Y285 508 aaKnown RBP9.39□□□□□ -0.91
CSMD1-217ENST00000602723 PRPS1L1P21108 318 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 EDNRAP25101 427 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 CD40LGP29965 261 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SLC3A1Q07837 685 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 HMBOX1Q6NT76 420 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 MARCH9Q86YJ5 346 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 JAGN1Q8N5M9 183 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 SPPL2BQ8TCT7 592 aa9.38□□□□□ -0.91
CSMD1-217ENST00000602723 KLHL6Q8WZ60 621 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms