RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 GALPQ9UBC7 116 aa17.17■□□□□ 0.34
CHMP2A-208ENST00000601220 ZC3H7BQ9UGR2 993 aaKnown RBP17.17■□□□□ 0.34
CHMP2A-208ENST00000601220 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
CHMP2A-208ENST00000601220 IGKV1-8A0A0C4DH67 115 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 VAPBO95292 243 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 ZGLP1P0C6A0 271 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 FMO4P31512 558 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 EIF3BP55884 814 aaKnown RBP17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 ZNF169Q14929 603 aaPredicted RBP17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 KCTD19Q17RG1 926 aaPredicted RBP17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 TYSND1Q2T9J0 566 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 B3GNTL1Q67FW5 361 aaPredicted RBP17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 PRMT9Q6P2P2 845 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 CNSTQ6PJW8 725 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 LAPTM4BQ86VI4 370 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 ARHGEF39Q8N4T4 335 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 CATSPER1Q8NEC5 780 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 COG1Q8WTW3 980 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 FAR1Q8WVX9 515 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 PSMF1Q92530 271 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 LMF1Q96S06 567 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 CRB3Q9BUF7 120 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 BFARQ9NZS9 450 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 GUCA1BQ9UMX6 200 aa17.16■□□□□ 0.34
CHMP2A-208ENST00000601220 MYO9AB2RTY4 2548 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 CENPEQ02224 2701 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 A0A1W2PQ72 361 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 TCRBV7S3A2A0A539 114 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ARHGEF33A8MVX0 844 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 GOLGA8KD6RF30 607 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 GOLGA8TH3BQL2 631 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 NIPSNAP2O75323 286 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 HPP00738 406 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 MGAT1P26572 445 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ATP5DP30049 168 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 CDC25BP30305 580 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 CARSP49589 748 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 EMP3P54852 163 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ADARP55265 1226 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ELOAQ14241 798 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 VWA2Q5GFL6 755 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 LRRC8BQ6P9F7 803 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ISLR2Q6UXK2 745 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 OR9A1PQ8NGU1 263 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 GSDMBQ8TAX9 411 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 SKA2Q8WVK7 121 aaPredicted RBP17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 MIEF2Q96C03 454 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 C8orf44Q96CB5 159 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ZFYVE21Q9BQ24 234 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 TRIM56Q9BRZ2 755 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 DPH7Q9BTV6 452 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 SYBUQ9NX95 663 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 ZNF282Q9UDV7 671 aaPredicted RBP17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 FAM169AQ9Y6X4 670 aa17.15■□□□□ 0.34
CHMP2A-208ENST00000601220 NUP210LQ5VU65 1888 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 H0YGG7 62 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 MYO1CO00159 1063 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 PSIP1O75475 530 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 EDN3P14138 238 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 SOX11P35716 441 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 KCNJ1P48048 391 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 ARF3P61204 181 aaPredicted RBP17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 MFAP5Q13361 173 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 TLR1Q15399 786 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 RPS6KA1Q15418 735 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 ACSBG2Q5FVE4 666 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 RPUSD3Q6P087 351 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 C4orf22Q6V702 233 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 LINC00696Q6ZRV3 163 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 RAB42Q8N4Z0 105 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 MAGEC3Q8TD91 643 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 FOPNLQ96NB1 174 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 SLX1AQ9BQ83 275 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 PLCD4Q9BRC7 762 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 ZNF160Q9HCG1 818 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 C3orf18Q9UK00 162 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 SOX13Q9UN79 622 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 CELSR2Q9HCU4 2923 aa17.14■□□□□ 0.33
CHMP2A-208ENST00000601220 DOCK10Q96BY6 2186 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 AP3B1O00203 1094 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ESR1P03372 595 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 EIF2S1P05198 315 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 COX6A1P12074 109 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ACPPP15309 386 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 TPSB2P20231 275 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 BASP1P80723 227 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 OCA2Q04671 838 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 CDC16Q13042 620 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 TPSAB1Q15661 275 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 MUM1Q2TAK8 710 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ANKRD20A4Q4UJ75 823 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 IRAK1BP1Q5VVH5 260 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ZNF324BQ6AW86 544 aaPredicted RBP17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 ZNF425Q6IV72 752 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 MRNIPQ6NTE8 343 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 CENPUQ71F23 418 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 NDUFAF7Q7L592 441 aa17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 SDCCAG8Q86SQ7 713 aaPredicted RBP17.13■□□□□ 0.33
CHMP2A-208ENST00000601220 PAQR7Q86WK9 346 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms