RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NDUFS2O75306 463 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 CCDC159P0C7I6 412 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 OR56A5P0C7T3 313 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 OCM2P0CE71 109 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 OCMP0CE72 109 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 SRCP12931 536 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 OPRL1P41146 370 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 HALP42357 657 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 FRG2Q64ET8 278 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 LAIR1Q6GTX8 287 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 OR2T5Q6IEZ7 315 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 USP45Q70EL2 814 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 B3GNT8Q7Z7M8 397 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 L3MBTL4Q8NA19 623 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 OR2T29Q8NH02 315 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 FAR1Q8WVX9 515 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 FRG2BQ96QU4 278 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 HHIPQ96QV1 700 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 PANX1Q96RD7 426 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 IL1RAPQ9NPH3 570 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 KIAA1522Q9P206 1035 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 ERVK-18Q9QC07 812 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 ZNF510Q9Y2H8 683 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 MYOFQ9NZM1 2061 aa19.64■□□□□ 0.73
SHKBP1-225ENST00000600733 ZNF99A8MXY4 864 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 EVPLLA8MZ36 301 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 CFAP99D6REC4 459 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 C8GP07360 202 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 ENGP17813 658 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 PRPH2P23942 346 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 CLK3P49761 638 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 IL18R1Q13478 541 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 NELL1Q92832 810 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 DPH2Q9BQC3 489 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 RHNO1Q9BSD3 238 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 BBS2Q9BXC9 721 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 LSM7Q9UK45 103 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 DOLKQ9UPQ8 538 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 IGLV3-16A0A075B6K0 115 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 CLIC1O00299 241 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 FPGTO14772 594 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 EFNA1P20827 205 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 MAPK1P28482 360 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 MAP2K4P45985 399 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 VLDLRP98155 873 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 CHIT1Q13231 466 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 SF1Q15637 639 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 BTLAQ7Z6A9 289 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 TMCO2Q7Z6W1 182 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 SERPINA11Q86U17 422 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 ANKRD13BQ86YJ7 626 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 FAM9CQ8IZT9 166 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 CDC26Q8NHZ8 85 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 SUV39H2Q9H5I1 410 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 ZDHHC6Q9H6R6 413 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 HMX1Q9NP08 348 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 KLHL42Q9P2K6 505 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 FAM8A1Q9UBU6 413 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 TMED5Q9Y3A6 229 aa19.63■□□□□ 0.73
SHKBP1-225ENST00000600733 NUAK1O60285 661 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 AOC2O75106 756 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 KCNK5O95279 499 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 FUCA1P04066 466 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 C1SP09871 688 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 GABRR2P28476 465 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 EPHA2P29317 976 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 IDUAP35475 653 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 SNRPD1P62314 119 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PHEXP78562 749 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 ITGADQ13349 1161 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 GBX1Q14549 363 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 UGT8Q16880 541 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 ZNF621Q6ZSS3 439 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 IGFN1Q86VF2 1251 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 SYT12Q8IV01 421 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 TCAIMQ8N3R3 496 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 ZNF566Q969W8 418 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 ECHDC3Q96DC8 303 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 DNAJC11Q9NVH1 559 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 COQ6Q9Y2Z9 468 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PDE4DIPQ5VU43 2346 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PABPN1LA6NDY0 278 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 NRG2O14511 850 aaPredicted RBP19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PARNO95453 639 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 UGT2B4P06133 528 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 CD6P30203 668 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 HNMTP50135 292 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 CCR3P51677 355 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PTPN5P54829 565 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 MTAPQ13126 283 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 RAB33AQ14088 237 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 DUOXA1Q1HG43 343 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 KDM4DQ6B0I6 523 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 TTC23LQ6PF05 361 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 GAREM2Q75VX8 874 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 ZZZ3Q8IYH5 903 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 CLECL1Q8IZS7 167 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 CMTM8Q8IZV2 173 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PARP8Q8N3A8 854 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms