RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 ZGRF1Q86YA3 2104 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 A0A0J9YVX5 310 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 PRSS44E7EML9 344 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 C1orf105O95561 183 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 ERVK-10P10266 1014 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 PRF1P14222 555 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 CXCR2P25025 360 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 EMP3P54852 163 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 FRMPD2BQ6IN97 320 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 RNF44Q7L0R7 432 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 OTOAQ7RTW8 1153 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 PRSS58Q8IYP2 241 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 OR2A1Q8NGT9 310 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 SKA2Q8WVK7 121 aaPredicted RBP16.39■□□□□ 0.21
SMG9-210ENST00000600097 NR4A3Q92570 626 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 HAS2Q92819 552 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 MAGEB10Q96LZ2 347 aaPredicted RBP16.39■□□□□ 0.21
SMG9-210ENST00000600097 FOPNLQ96NB1 174 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 GNPTGQ9UJJ9 305 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 CDC14AQ9UNH5 594 aa16.39■□□□□ 0.21
SMG9-210ENST00000600097 REXO2Q9Y3B8 237 aaKnown RBP16.39■□□□□ 0.21
SMG9-210ENST00000600097 LOC105369274A0A096LPK9 316 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 LOC102723532A0A0G2JNH3 316 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 A0A1W2PQ72 361 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PCDH17O14917 1159 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PRPF4O43172 522 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMG9-210ENST00000600097 MED26O95402 600 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 EIF2S1P05198 315 aaKnown RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 SERPINA7P05543 415 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PRR35P0CG20 571 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 FBLP22087 321 aaKnown RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 PSMB5P28074 263 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 SOX11P35716 441 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 GRIA1P42261 906 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 TNFSF10P50591 281 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 ART3Q13508 389 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 RIPOR1Q6ZS17 1223 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 LDB1Q86U70 411 aaPredicted RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 LRRC6Q86X45 466 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 OR4N4Q8N0Y3 316 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 MPP5Q8N3R9 675 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PPHLN1Q8NEY8 458 aaKnown RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 PSMF1Q92530 271 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 C8orf44Q96CB5 159 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 MVB12AQ96EY5 273 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 ZFYVE21Q9BQ24 234 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 MESP1Q9BRJ9 268 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 FRMD8P1Q9BZ68 369 aaPredicted RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 UNKQ9C0B0 810 aaKnown RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 P2RY12Q9H244 342 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 SPATA7Q9P0W8 599 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PTGFRNQ9P2B2 879 aa16.38■□□□□ 0.21
SMG9-210ENST00000600097 PACSIN2Q9UNF0 486 aaPredicted RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 TEP1Q99973 2627 aaKnown RBP16.38■□□□□ 0.21
SMG9-210ENST00000600097 TCRBV7S2A1N4TA0A589 114 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 OR2A25A4D2G3 310 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 IDSB3KWA1 339 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 CD3EAPO15446 510 aaKnown RBP16.37■□□□□ 0.21
SMG9-210ENST00000600097 PHF2O75151 1096 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 BMP10O95393 424 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 IFNB1P01574 187 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 COX6A1P12074 109 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 RPS3P23396 243 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMG9-210ENST00000600097 CMPK1P30085 196 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 BDKRB1P46663 353 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 TDGF1P3P51864 188 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 EMP2P54851 167 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 AP2B1P63010 937 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 PRTGQ2VWP7 1150 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 VWA2Q5GFL6 755 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 CNSTQ6PJW8 725 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 MCEMP1Q8IX19 187 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 BRIX1Q8TDN6 353 aaKnown RBP16.37■□□□□ 0.21
SMG9-210ENST00000600097 ATG4AQ8WYN0 398 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 TAAR6Q96RI8 345 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 RAB6BQ9NRW1 208 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 C14orf105Q9NVL8 296 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 RIC8BQ9NVN3 520 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 MARCH4Q9P2E8 410 aaPredicted RBP16.37■□□□□ 0.21
SMG9-210ENST00000600097 SUCOQ9UBS9 1254 aaKnown RBP16.37■□□□□ 0.21
SMG9-210ENST00000600097 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
SMG9-210ENST00000600097 KLF2Q9Y5W3 355 aaPredicted RBP16.37■□□□□ 0.21
SMG9-210ENST00000600097 NFS1Q9Y697 457 aa16.37■□□□□ 0.21
SMG9-210ENST00000600097 A0A1W2PPV9 198 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 VPS26AO75436 327 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 NDUFS3O75489 264 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 WFS1O76024 890 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 APRTP07741 180 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 UQCRHP07919 91 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 KCNK10P57789 538 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 DSG2Q14126 1118 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 OASLQ15646 514 aaKnown RBP16.36■□□□□ 0.21
SMG9-210ENST00000600097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.36■□□□□ 0.21
SMG9-210ENST00000600097 CCSMST1Q4G0I0 132 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 PCID2Q5JVF3 399 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 GFRALQ6UXV0 394 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
SMG9-210ENST00000600097 LAPTM4BQ86VI4 370 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms