RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 KRT6AP02538 564 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 KRT6BP04259 564 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 NDUFS1P28331 727 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 KRT6CP48668 564 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 TBCCQ15814 346 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 TRIM46Q7Z4K8 759 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 CPSF7Q8N684 471 aaKnown RBP22.53■■□□□ 1.2
SYMPK-212ENST00000598896 WDR34Q96EX3 536 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 ELOVL6Q9H5J4 265 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 SLC40A1Q9NP59 571 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 SNX6Q9UNH7 406 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 VPS13AQ96RL7 3174 aa22.53■■□□□ 1.2
SYMPK-212ENST00000598896 TTC28Q96AY4 2481 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 UBDO15205 165 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 VPS4BO75351 444 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 HMGCS1Q01581 520 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 KRT72Q14CN4 511 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 ATG9BQ674R7 924 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 ADNP2Q6IQ32 1131 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 SLC37A2Q8TED4 501 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 SELENOMQ8WWX9 145 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 SH3KBP1Q96B97 665 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 PTCD3Q96EY7 689 aaKnown RBP22.52■■□□□ 1.2
SYMPK-212ENST00000598896 MAGEB10Q96LZ2 347 aaPredicted RBP22.52■■□□□ 1.2
SYMPK-212ENST00000598896 HAUS8Q9BT25 410 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 SPNS1Q9H2V7 528 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 PFDN4Q9NQP4 134 aa22.52■■□□□ 1.2
SYMPK-212ENST00000598896 LSM1O15116 133 aaKnown RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 CDH1P12830 882 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 LBPP18428 481 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 HNF4AP41235 474 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 PLK5Q496M5 336 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 FRG2Q64ET8 278 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 RNF175Q8N4F7 328 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 FAM46DQ8NEK8 389 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 WDR20Q8TBZ3 569 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 FRG2BQ96QU4 278 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 ACPTQ9BZG2 426 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 RIC8BQ9NVN3 520 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 CPNE7Q9UBL6 633 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 A0A1B0GVT2 93 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 H0YIV9 168 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 UNC5CO95185 931 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 C1GALT1C1LP0DN25 315 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 XRCC1P18887 633 aaPredicted RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 PEBP1P30086 187 aaKnown RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 C21orf59P57076 290 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 UBE2IP63279 158 aaKnown RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 MEF2AQ02078 507 aaPredicted RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 KLF10Q13118 480 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 GPR18Q14330 331 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 ELOCQ15369 112 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 C6orf136Q5SQH8 315 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 OGFOD2Q6N063 350 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 NXPE4Q6UWF7 544 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 OR4E2Q8NGC2 313 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 OR2A1Q8NGT9 310 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 LMX1AQ8TE12 382 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 LCN9Q8WX39 176 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 EHD1Q9H4M9 534 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 CUEDC1Q9NWM3 386 aaPredicted RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 GEMIN8Q9NWZ8 242 aaKnown RBP22.51■■□□□ 1.19
SYMPK-212ENST00000598896 SPHK1Q9NYA1 384 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 FBXO4Q9UKT5 387 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 CAPN7Q9Y6W3 813 aa22.51■■□□□ 1.19
SYMPK-212ENST00000598896 SLBPQ14493 270 aaKnown RBP eCLIP22.5■■□□□ 1.19
SYMPK-212ENST00000598896 NR6A1Q15406 480 aa22.5■■□□□ 1.19
SYMPK-212ENST00000598896 AMIGO1Q86WK6 493 aa22.5■■□□□ 1.19
SYMPK-212ENST00000598896 TRIM48Q8IWZ4 208 aa22.5■■□□□ 1.19
SYMPK-212ENST00000598896 ZNF548Q8NEK5 533 aaPredicted RBP22.5■■□□□ 1.19
SYMPK-212ENST00000598896 ZDHHC1Q8WTX9 485 aa22.5■■□□□ 1.19
SYMPK-212ENST00000598896 POT1Q9NUX5 634 aa22.5■■□□□ 1.19
SYMPK-212ENST00000598896 TMEM131Q92545 1883 aa22.5■■□□□ 1.19
SYMPK-212ENST00000598896 KIR2DS5A0A0G2JLQ3 304 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 A0A0G2JNG1 304 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 B4DGG1 531 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 KIR2DS3K7RE56 304 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 PRICKLE3O43900 615 aaPredicted RBP22.49■■□□□ 1.19
SYMPK-212ENST00000598896 SDC3O75056 442 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 SHMT2P34897 504 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 SCTRP47872 440 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 KIR2DS5Q14953 304 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 ATP6AP1LQ52LC2 224 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 C11orf74Q86VG3 221 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 C17orf64Q86WR6 236 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 OR7G3Q8NG95 312 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 NELL1Q92832 810 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 PCBD2Q9H0N5 130 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 OR5K4A6NMS3 321 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 RGS14O43566 566 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 KDM1AO60341 852 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 VIPP01282 170 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 DIO3P55073 304 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 NCALDP61601 193 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 RFTN2Q52LD8 501 aaPredicted RBP22.49■■□□□ 1.19
SYMPK-212ENST00000598896 ICE2Q659A1 982 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 FAM129CQ86XR2 697 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 FAM20CQ8IXL6 584 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 FBXL6Q8N531 539 aa22.49■■□□□ 1.19
SYMPK-212ENST00000598896 ZNF740Q8NDX6 193 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms