RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PPFIBP2Q8ND30 876 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 OR2A1Q8NGT9 310 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 GRK7Q8WTQ7 553 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 SELENOSQ9BQE4 189 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 RAB11FIP5Q9BXF6 653 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
SCAF1-203ENST00000598359 ABCF3Q9NUQ8 709 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 INTS7Q9NVH2 962 aaKnown RBP13.19□□□□□ -0.3
SCAF1-203ENST00000598359 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 PLAAQ9Y263 795 aa13.19□□□□□ -0.3
SCAF1-203ENST00000598359 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 LOC105369274A0A096LPK9 316 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 LOC102723532A0A0G2JNH3 316 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 A0A0J9YVX5 310 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 PSIP1O75475 530 aaKnown RBP13.18□□□□□ -0.3
SCAF1-203ENST00000598359 HAUS5O94927 633 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 MED26O95402 600 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 UMODP07911 640 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 GP1BBP13224 206 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 ATP5DP30049 168 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 GCGRP47871 477 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 PGDP52209 483 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 CYP2A13Q16696 494 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
SCAF1-203ENST00000598359 SHISA6Q6ZSJ9 500 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 MRGPREQ86SM8 312 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 IGDCC3Q8IVU1 814 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 OR4N4Q8N0Y3 316 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 RAB42Q8N4Z0 105 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 FDCSPQ8NFU4 85 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 OR9A1PQ8NGU1 263 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 PROKR1Q8TCW9 393 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 AENQ8WTP8 325 aaKnown RBP13.18□□□□□ -0.3
SCAF1-203ENST00000598359 PWWP2AQ96N64 755 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 PKP4Q99569 1192 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 GPR21Q99679 349 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 NUDT9Q9BW91 350 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 SYNPO2LQ9H987 977 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 SLC6A20Q9NP91 592 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 SPATA7Q9P0W8 599 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 SLC17A6Q9P2U8 582 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 DMGDHQ9UI17 866 aaKnown RBP13.18□□□□□ -0.3
SCAF1-203ENST00000598359 FBXO5Q9UKT4 447 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 PADI2Q9Y2J8 665 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 CREBBPQ92793 2442 aa13.18□□□□□ -0.3
SCAF1-203ENST00000598359 DNALI1O14645 258 aaPredicted RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 EIF2S1P05198 315 aaKnown RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 FOLR3P41439 243 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 OR1D4P47884 311 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 FOXK1P85037 733 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 DHX9Q08211 1270 aaKnown RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 PTK6Q13882 451 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 CRYMQ14894 314 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 NADK2Q4G0N4 442 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 ZC3H12BQ5HYM0 836 aaKnown RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 WASHC2DQ5SRD0 308 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 ARMC3Q5W041 872 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 COX15Q7KZN9 410 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 HDXQ7Z353 690 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 PIWIL4Q7Z3Z4 852 aaKnown RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 KCNMB4Q86W47 210 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 RAB43Q86YS6 212 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 KLHL7Q8IXQ5 586 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 CPNE9Q8IYJ1 553 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 HMGCLL1Q8TB92 370 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 MAGEC3Q8TD91 643 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 NDNQ99608 321 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 DPH7Q9BTV6 452 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 DHRS4Q9BTZ2 278 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 MFRPQ9BY79 579 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 CCDC68Q9H2F9 335 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 CUTCQ9NTM9 273 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 MAU2Q9Y6X3 613 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 FAM169AQ9Y6X4 670 aa13.17□□□□□ -0.3
SCAF1-203ENST00000598359 USP9YO00507 2555 aaPredicted RBP13.17□□□□□ -0.3
SCAF1-203ENST00000598359 NBASA2RRP1 2371 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 SEC16AO15027 2179 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 A0A1B0GX78 115 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 TARM1B6A8C7 271 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 MYO1CO00159 1063 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 DSCR3O14972 297 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 ALOX12BO75342 701 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 CEACAM4O75871 244 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 SLC16A8O95907 504 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 SYF2O95926 243 aaKnown RBP13.16□□□□□ -0.3
SCAF1-203ENST00000598359 CATP04040 527 aaKnown RBP13.16□□□□□ -0.3
SCAF1-203ENST00000598359 ERGP11308 486 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 PGAM1P18669 254 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 IVDP26440 423 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms