RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 H0YIV9 168 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 ARPC2O15144 300 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 PGRP06401 933 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 NPPBP16860 134 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 CLDN8P56748 225 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 PHC1P78364 1004 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 BNIP2Q12982 314 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 PWP1Q13610 501 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 TSTA3Q13630 321 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 PON2Q15165 354 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 GRAMD1BQ3KR37 738 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 ANO7Q6IWH7 933 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 SLCO4C1Q6ZQN7 724 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 LRRTM4Q86VH4 590 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 RALGPS2Q86X27 583 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 TP53I13Q8NBR0 393 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 OR2T34Q8NGX1 318 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 GANCQ8TET4 914 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 ZUFSPQ96AP4 578 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 DUS3LQ96G46 650 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 LRGUKQ96M69 825 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 UHRF1Q96T88 793 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 CGREF1Q99674 301 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 NRTNQ99748 197 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 PIF1Q9H611 641 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 TRPV5Q9NQA5 729 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 DUSP12Q9UNI6 340 aa16.49■□□□□ 0.23
SHKBP1-216ENST00000598201 A0A1W2PQF6 199 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 DFNA5O60443 496 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 FUCA1P04066 466 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 HNF4AP41235 474 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 EEFSECP57772 596 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 MTPNP58546 118 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 TAP2Q03519 686 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 SPATS1Q496A3 300 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 CATSPEREQ5SY80 951 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 LCN8Q6JVE9 175 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 CAPN13Q6MZZ7 669 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 PDZD3Q86UT5 571 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 GALNT13Q8IUC8 556 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 OR5AR1Q8NGP9 310 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 OR14C36Q8NHC7 312 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 CANT1Q8WVQ1 401 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 IL17FQ96PD4 163 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 KCTD14Q9BQ13 255 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 SGPP1Q9BX95 441 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 EBPLQ9BY08 206 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 SGK2Q9HBY8 427 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 SLC2A4RGQ9NR83 387 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 SPATA6Q9NWH7 488 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 VAPAQ9P0L0 249 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 ACTR3BQ9P1U1 418 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 PLAGL1Q9UM63 463 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 PPT2Q9UMR5 302 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 ASF1AQ9Y294 204 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 KCNE2Q9Y6J6 123 aa16.48■□□□□ 0.23
SHKBP1-216ENST00000598201 PEX1O43933 1283 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 ETHE1O95571 254 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 KLF8O95600 359 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 IL6P05231 212 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 MTHFD1P11586 935 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 PRPS2P11908 318 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 NCK1P16333 377 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 SLC7A1P30825 629 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 TRIM23P36406 574 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 CCR3P51677 355 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 CSTF3Q12996 717 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 E2F2Q14209 437 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 MAPKAPK3Q16644 382 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 NOXRED1Q6NXP6 359 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 TMPRSS11BQ86T26 416 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 DNASE1L2Q92874 299 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 FCRL1Q96LA6 429 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 C1QTNF2Q9BXJ5 285 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 VCX3BQ9H321 246 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 WDR26Q9H7D7 661 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 TMED5Q9Y3A6 229 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 C15orf38-AP3S2A0A0A6YYH1 394 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 A0A1W2PQU0 124 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 MAGEB17A8MXT2 336 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 LRATO95237 230 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 KCNH1O95259 989 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 STAMBPO95630 424 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 B3GALT4O96024 378 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 OR4D2P58180 307 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 IER5LQ5T953 404 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 UNC5DQ6UXZ4 953 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 ARPINQ7Z6K5 226 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 PTRH1Q86Y79 214 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 MSRB3Q8IXL7 192 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 OXR1Q8N573 874 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 OR7G3Q8NG95 312 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 GFM2Q969S9 779 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 FAM131CQ96AQ9 280 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 OR52E6Q96RD3 313 aa16.47■□□□□ 0.23
SHKBP1-216ENST00000598201 CXorf56Q9H5V9 222 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms