RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 AHSGP02765 367 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 ALBP02768 609 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 UMODP07911 640 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 GABRB3P28472 473 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 RPA3P35244 121 aaPredicted RBP14.42□□□□□ -0.1
LIG1-215ENST00000597901 OR1D4P47884 311 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 CARSP49589 748 aaKnown RBP14.42□□□□□ -0.1
LIG1-215ENST00000597901 MLLT10P55197 1068 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 TIAL1Q01085 375 aaKnown RBP eCLIP14.42□□□□□ -0.1
LIG1-215ENST00000597901 TAP2Q03519 686 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 PRDX1Q06830 199 aaKnown RBP14.42□□□□□ -0.1
LIG1-215ENST00000597901 TSTA3Q13630 321 aaPredicted RBP14.42□□□□□ -0.1
LIG1-215ENST00000597901 CRYMQ14894 314 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 BBS9Q3SYG4 887 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 SPANXN3Q5MJ09 141 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 MRGPREQ86SM8 312 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 CD200R1Q8TD46 325 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 ZNF480Q8WV37 535 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.42□□□□□ -0.1
LIG1-215ENST00000597901 PDLIM2Q96JY6 352 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 FER1L6-AS2Q96M78 137 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 NAT9Q9BTE0 207 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 SLC6A20Q9NP91 592 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 MRPS30Q9NP92 439 aaKnown RBP14.42□□□□□ -0.1
LIG1-215ENST00000597901 ZNF451Q9Y4E5 1061 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 PCDHGB7Q9Y5F8 929 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 SAR1BQ9Y6B6 198 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 SPTA1P02549 2419 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 ZNF839A8K0R7 811 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 VPS26AO75436 327 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 MED26O95402 600 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 SYF2O95926 243 aaKnown RBP14.41□□□□□ -0.1
LIG1-215ENST00000597901 IGHEP01854 428 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 EIF2S1P05198 315 aaKnown RBP14.41□□□□□ -0.1
LIG1-215ENST00000597901 SKIV2L2P42285 1042 aaKnown RBP14.41□□□□□ -0.1
LIG1-215ENST00000597901 NAA25Q14CX7 972 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 NKG7Q16617 165 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 NADK2Q4G0N4 442 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 UGT3A1Q6NUS8 523 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 SYDE1Q6ZW31 735 aaPredicted RBP14.41□□□□□ -0.1
LIG1-215ENST00000597901 RNF44Q7L0R7 432 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 PPP1R32Q7Z5V6 425 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 LRRC56Q8IYG6 542 aaPredicted RBP14.41□□□□□ -0.1
LIG1-215ENST00000597901 CPNE9Q8IYJ1 553 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 PPFIBP2Q8ND30 876 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 FKBP10Q96AY3 582 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 PWWP2AQ96N64 755 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 ZFYVE21Q9BQ24 234 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 PLCD4Q9BRC7 762 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 NUDT9Q9BW91 350 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 P4HTMQ9NXG6 502 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 STOX2Q9P2F5 926 aaPredicted RBP14.41□□□□□ -0.1
LIG1-215ENST00000597901 PYCARDQ9ULZ3 195 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 BSNQ9UPA5 3926 aa14.41□□□□□ -0.1
LIG1-215ENST00000597901 IGKV1-8A0A0C4DH67 115 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 H0YGG7 62 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 EIF3FO00303 357 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 ELK3P41970 407 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 ARF3P61204 181 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 ABATP80404 500 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 DR1Q01658 176 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 MORF4L2Q15014 288 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 DCAF10Q5QP82 559 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 HP1BP3Q5SSJ5 553 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 ICE2Q659A1 982 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 UBE2R2Q712K3 238 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 COX15Q7KZN9 410 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 PIWIL4Q7Z3Z4 852 aaKnown RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 PAQR7Q86WK9 346 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 PDIK1LQ8N165 341 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 METTL27Q8N6F8 245 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 GABPB2Q8TAK5 448 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 EEF1AKMT1Q8WVE0 214 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 NACC2Q96BF6 587 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 RUNDC3BQ96NL0 473 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 NDNQ99608 321 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 NAPGQ99747 312 aaPredicted RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 SLC26A1Q9H2B4 701 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 WDR54Q9H977 334 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 PLAC1Q9HBJ0 212 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 ZNF304Q9HCX3 659 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 ABCF3Q9NUQ8 709 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 GPR83Q9NYM4 423 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 TAS2R13Q9NYV9 303 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 ANKMY1Q9P2S6 941 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 TAC3Q9UHF0 121 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 TRMT6Q9UJA5 497 aaKnown RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 G3BP2Q9UN86 482 aaKnown RBP14.4□□□□□ -0.1
LIG1-215ENST00000597901 PLAAQ9Y263 795 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 MAU2Q9Y6X3 613 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 SEC16AO15027 2179 aa14.4□□□□□ -0.1
LIG1-215ENST00000597901 VSTM2BA6NLU5 285 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 TTLL8A6PVC2 850 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 MASP2O00187 686 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 SMAPO00193 183 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 CCNDBP1O95273 360 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 MMP11P24347 488 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 PAFAH1B1P43034 410 aa14.39□□□□□ -0.11
LIG1-215ENST00000597901 SOX8P57073 446 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms