RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 LUC7L2Q9Y383 392 aaKnown RBP9.63□□□□□ -0.87
TRIM28-210ENST00000597618 KLK4Q9Y5K2 254 aa9.63□□□□□ -0.87
TRIM28-210ENST00000597618 PRSS21Q9Y6M0 314 aa9.63□□□□□ -0.87
TRIM28-210ENST00000597618 FLNAP21333 2647 aaKnown RBP9.63□□□□□ -0.87
TRIM28-210ENST00000597618 ABCA4P78363 2273 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 CPAMD8Q8IZJ3 1885 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 ASPDHA6ND91 283 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 NPIPA5E9PKD4 350 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 PRRG2O14669 202 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 SPOPO43791 374 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 EIF2S1P05198 315 aaKnown RBP9.62□□□□□ -0.87
TRIM28-210ENST00000597618 OR56A5P0C7T3 313 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 IGFBP2P18065 325 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 PSMB4P28070 264 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 EEF1DP29692 281 aaKnown RBP9.62□□□□□ -0.87
TRIM28-210ENST00000597618 EMP3P54852 163 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 PPP2R2AP63151 447 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 NAA25Q14CX7 972 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 FRMPD2BQ6IN97 320 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 UNC5DQ6UXZ4 953 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 NAPRTQ6XQN6 538 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 RNF44Q7L0R7 432 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 TMEM200AQ86VY9 491 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 TGIF2LYQ8IUE0 185 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 RHOT2Q8IXI1 618 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 SLC22A15Q8IZD6 547 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 GHDCQ8N2G8 530 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 LMNTD1Q8N9Z9 388 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 CABS1Q96KC9 395 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 C10orf90Q96M02 699 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 FRMD6Q96NE9 622 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 IL17FQ96PD4 163 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 DMRTA2Q96SC8 542 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 FOXC2Q99958 501 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 TMEM121Q9BTD3 319 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 YIPF2Q9BWQ6 316 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 CXXC4Q9H2H0 198 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 ARNT2Q9HBZ2 717 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 MKKSQ9NPJ1 570 aaPredicted RBP9.62□□□□□ -0.87
TRIM28-210ENST00000597618 NLE1Q9NVX2 485 aaPredicted RBP9.62□□□□□ -0.87
TRIM28-210ENST00000597618 SLC39A10Q9ULF5 831 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 PPT2Q9UMR5 302 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 NPIPA1Q9UND3 350 aa9.62□□□□□ -0.87
TRIM28-210ENST00000597618 hCG_1818297A0A087WSY0 165 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 LOC105369274A0A096LPK9 316 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 LOC102723532A0A0G2JNH3 316 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 A0A0J9YVX5 310 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 H7C0C1 242 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 PSTPIP1O43586 416 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 STK10O94804 968 aaKnown RBP9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ANXA5P08758 320 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 CD46P15529 392 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 KLK2P20151 261 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 RBL1P28749 1068 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 DNAJA1P31689 397 aaKnown RBP9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ATP5OP48047 213 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 CSE1LP55060 971 aaKnown RBP9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TUBA3CQ13748 450 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 GRB7Q14451 532 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ACER2Q5QJU3 275 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 DENND5AQ6IQ26 1287 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TUBA3EQ6PEY2 450 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TMEM205Q6UW68 189 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 DOLPP1Q86YN1 238 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 SIAH3Q8IW03 269 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 OR4N4Q8N0Y3 316 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 BEST3Q8N1M1 668 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 RAB42Q8N4Z0 105 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 DNAAF3Q8N9W5 541 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TMEM178AQ8NBL3 297 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 FAM98AQ8NCA5 519 aaKnown RBP9.61□□□□□ -0.87
TRIM28-210ENST00000597618 MDS2Q8NDY4 140 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 NINJ1Q92982 152 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 SCMH1Q96GD3 660 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 CDKN2AIPNLQ96HQ2 116 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ZNF354BQ96LW1 612 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ALS2CR12Q96Q35 445 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ZFYVE21Q9BQ24 234 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 ZNF559Q9BR84 538 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 UTP23Q9BRU9 249 aaKnown RBP9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TRIM51Q9BSJ1 452 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TSSK1BQ9BXA7 367 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 TGIF2Q9GZN2 237 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 KLHL1Q9NR64 748 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 IMPACTQ9P2X3 320 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 CIDEBQ9UHD4 219 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 MKL2Q9ULH7 1088 aa9.61□□□□□ -0.87
TRIM28-210ENST00000597618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.61□□□□□ -0.873e-9■□□□□ 10.3
TRIM28-210ENST00000597618 TMEM200CA6NKL6 621 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 A8MUI8 341 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 APOC4-APOC2K7ER74 178 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 ADAM10O14672 748 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 FFAR3O14843 346 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 GPR42O15529 346 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 ASNA1O43681 348 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 PHF2O75151 1096 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 VPS26AO75436 327 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 APOC2P02655 101 aa9.6□□□□□ -0.87
TRIM28-210ENST00000597618 GYPCP04921 128 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms