RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 F7P08709 466 aaPredicted RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 CARSP49589 748 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 EMP3P54852 163 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 RRADP55042 308 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 ABATP80404 500 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TAP2Q03519 686 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TLE1Q04724 770 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 CUL1Q13616 776 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 HIF1AQ16665 826 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 SUSD1Q6UWL2 747 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 RNF44Q7L0R7 432 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 RAB43Q86YS6 212 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 LRRC56Q8IYG6 542 aaPredicted RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TTC29Q8NA56 475 aaPredicted RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TEX19Q8NA77 164 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 FKBP10Q96AY3 582 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 CERS2Q96G23 380 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 SNF8Q96H20 258 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 ZFYVE21Q9BQ24 234 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 PLCD4Q9BRC7 762 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 SLC25A23Q9BV35 468 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 ACAT2Q9BWD1 397 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 PLAC1Q9HBJ0 212 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 MRPS30Q9NP92 439 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 UTP6Q9NYH9 597 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TAS2R13Q9NYV9 303 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 ZC3H7BQ9UGR2 993 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TRMT6Q9UJA5 497 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TSR3Q9UJK0 312 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 PTRH2Q9Y3E5 179 aaKnown RBP10.07□□□□□ -0.8
CCDC9-203ENST00000596938 TEX264Q9Y6I9 313 aa10.07□□□□□ -0.8
CCDC9-203ENST00000596938 PIKFYVEQ9Y2I7 2098 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 LOC105369274A0A096LPK9 316 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 IGKV1-8A0A0C4DH67 115 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 LOC102723532A0A0G2JNH3 316 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 A0A0J9YVX5 310 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 HYKKA2RU49 373 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 NDC80O14777 642 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 FANCGO15287 622 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 SLC16A5O15375 505 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 TTI1O43156 1089 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CNOT3O75175 753 aaKnown RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 SEC31AO94979 1220 aaKnown RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CCNDBP1O95273 360 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PDGFAP04085 211 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 UMODP07911 640 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ITGAXP20702 1163 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 HRH2P25021 359 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 MCM3P25205 808 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 FOLR3P41439 243 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ELK3P41970 407 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 RGS4P49798 205 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PGDP52209 483 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ITGA8P53708 1063 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ARL4CP56559 192 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 VSX2P58304 361 aaPredicted RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CHAF1BQ13112 559 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ICE2Q659A1 982 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CPZQ66K79 652 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 STEAP4Q687X5 459 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 FRMPD2BQ6IN97 320 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ZNF425Q6IV72 752 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PRMT9Q6P2P2 845 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PAQR3Q6TCH7 311 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 UBE2R2Q712K3 238 aaPredicted RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PIWIL4Q7Z3Z4 852 aaKnown RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PAQR7Q86WK9 346 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 HPS6Q86YV9 775 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CPNE9Q8IYJ1 553 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 OR4N4Q8N0Y3 316 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 MCOLN3Q8TDD5 553 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 EEF1AKMT1Q8WVE0 214 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 FER1L6-AS2Q96M78 137 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CCDC138Q96M89 665 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PWWP2AQ96N64 755 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CLMPQ9H6B4 373 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 WDR54Q9H977 334 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PARVBQ9HBI1 364 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 SLC6A20Q9NP91 592 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 PPANQ9NQ55 473 aaKnown RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 TAC3Q9UHF0 121 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 CORO1CQ9ULV4 474 aaPredicted RBP10.06□□□□□ -0.8
CCDC9-203ENST00000596938 ZNF451Q9Y4E5 1061 aa10.06□□□□□ -0.8
CCDC9-203ENST00000596938 VSTM2BA6NLU5 285 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 EFCAB8A8MWE9 144 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 E7ESA3 106 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 H0YGG7 62 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 PEX12O00623 359 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 TXNDC9O14530 226 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 SYF2O95926 243 aaKnown RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 C8GP07360 202 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 EZRP15311 586 aaKnown RBP10.05□□□□□ -0.8
CCDC9-203ENST00000596938 NR1D1P20393 614 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 IMPA1P29218 277 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 OTX2P32243 289 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 CDKN2DP55273 166 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 SOX8P57073 446 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 IL2P60568 153 aa10.05□□□□□ -0.8
CCDC9-203ENST00000596938 ARF3P61204 181 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms