RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TSNAXIP1Q2TAA8 658 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 ZNF470Q6ECI4 717 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 GDF7Q7Z4P5 450 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 HSD11B1LQ7Z5J1 315 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 GALNT13Q8IUC8 556 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 PLD6Q8N2A8 252 aaKnown RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 RFWD2Q8NHY2 731 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 STYXQ8WUJ0 223 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 TGM7Q96PF1 710 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 C19orf43Q9BQ61 176 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 CAB39LQ9H9S4 337 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 NOD2Q9HC29 1040 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 NPHS2Q9NP85 383 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 B3GNT3Q9Y2A9 372 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 COPG1Q9Y678 874 aaKnown RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 DOCK10Q96BY6 2186 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 FBN3Q75N90 2809 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 ANKHD1Q8IWZ3 2542 aaKnown RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 A0A087X1B8 175 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TTC24A2A3L6 582 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CCDC78A2IDD5 438 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TARM1B6A8C7 271 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 G3V2L1 256 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TRAFD1O14545 582 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 FZD6O60353 706 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 RASSF9O75901 435 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CRTAMO95727 393 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CPA3P15088 417 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 STMN1P16949 149 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TYRP1P17643 537 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 ITGA3P26006 1051 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 GPR1P46091 355 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 NCALDP61601 193 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 AP1S1P61966 158 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 IRF9Q00978 393 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CTBP1Q13363 440 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 USP10Q14694 798 aaKnown RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 SETDB1Q15047 1291 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TAF1AQ15573 450 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 Q6ZVL8 140 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TRIM74Q86UV6 250 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CENPLQ8N0S6 344 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CBARPQ8N350 705 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 TMEM151AQ8N4L1 468 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 BARD1Q99728 777 aaKnown RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 NLE1Q9NVX2 485 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 CPNE7Q9UBL6 633 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 ZNHIT2Q9UHR6 403 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 SLC39A10Q9ULF5 831 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 FARSAQ9Y285 508 aaKnown RBP12.43□□□□□ -0.42
SCAF1-202ENST00000595242 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
SCAF1-202ENST00000595242 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 CFAP73A6NFT4 308 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 LILRA5A6NI73 299 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TMEM114B3SHH9 223 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ATP5HO75947 161 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 HAUS5O94927 633 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 S1PR4O95977 384 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 SOD1P00441 154 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 SBK3P0C264 359 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ALOX15P16050 662 aaPredicted RBP12.42□□□□□ -0.42
SCAF1-202ENST00000595242 VIPR1P32241 457 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 SLC26A3P40879 764 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 KPNA2P52292 529 aaKnown RBP12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ARFIP2P53365 341 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TAS2R39P59534 338 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 PRAMEP78395 509 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 DPTQ07507 201 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.429e-6■■□□□ 12.4
SCAF1-202ENST00000595242 RAPSNQ13702 412 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 GALNT3Q14435 633 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TESK1Q15569 626 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TYSND1Q2T9J0 566 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 PWWP2BQ6NUJ5 590 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ZYG11AQ6WRX3 759 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 CHST15Q7LFX5 561 aaPredicted RBP12.42□□□□□ -0.42
SCAF1-202ENST00000595242 CRLF3Q8IUI8 442 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ST6GALNAC3Q8NDV1 305 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ADAMTS17Q8TE56 1095 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 STON2Q8WXE9 905 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 HDAC10Q969S8 669 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TSPAN17Q96FV3 270 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TSNARE1Q96NA8 513 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 GPR78Q96P69 363 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 LRRC37BQ96QE4 947 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 TMEM120AQ9BXJ8 343 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ILKAPQ9H0C8 392 aaPredicted RBP12.42□□□□□ -0.42
SCAF1-202ENST00000595242 MYLK2Q9H1R3 596 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 NMRAL1Q9HBL8 299 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 POPDC3Q9HBV1 291 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 PDE7BQ9NP56 450 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 ZNF358Q9NW07 568 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 HACD3Q9P035 362 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 C5AR2Q9P296 337 aa12.42□□□□□ -0.42
SCAF1-202ENST00000595242 OSGIN2Q9Y236 505 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms