RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CYBAP13498 195 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CTPS1P17812 591 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 SDC1P18827 310 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ALDH4A1P30038 563 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CDKN2CP42773 168 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 GDF5P43026 501 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PTPN5P54829 565 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 C21orf58P58505 322 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 LSM3P62310 102 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 ZNF45Q02386 682 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 NFATC2Q13469 925 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PGS1Q32NB8 556 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 SGO1Q5FBB7 561 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CATSPEREQ5SY80 951 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 USP43Q70EL4 1123 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CBARPQ8N350 705 aaPredicted RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 PIH1D2Q8WWB5 315 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 SELENOMQ8WWX9 145 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 HRASLS5Q96KN8 279 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CRISPLD1Q9H336 500 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 ASB8Q9H765 288 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 REEP1Q9H902 201 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 KCTD5Q9NXV2 234 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 CCDC59Q9P031 241 aaKnown RBP12.88□□□□□ -0.35
VRK3-209ENST00000594948 KIF17Q9P2E2 1029 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 PRSS21Q9Y6M0 314 aa12.88□□□□□ -0.35
VRK3-209ENST00000594948 KIAA1671Q9BY89 1806 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 H7C4K7 107 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 KCNK5O95279 499 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 GSTT2P0CG29 244 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 GSTT2BP0CG30 244 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 COL6A1P12109 1028 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 CYP4B1P13584 511 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 PTPN2P17706 415 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 EPORP19235 508 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 SRSF11Q05519 484 aaKnown RBP12.87□□□□□ -0.35
VRK3-209ENST00000594948 PRKCDQ05655 676 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 TWF1Q12792 350 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 NPRL3Q12980 569 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 KCNJ8Q15842 424 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 NDUFA5Q16718 116 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 PNCKQ6P2M8 343 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 NEK5Q6P3R8 708 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
VRK3-209ENST00000594948 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 L3MBTL4Q8NA19 623 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 CLHC1Q8NHS4 586 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 MYDGFQ969H8 173 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 BOCQ9BWV1 1114 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 MOV10Q9HCE1 1003 aaKnown RBP12.87□□□□□ -0.35
VRK3-209ENST00000594948 FKBP14Q9NWM8 211 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 GPRC5BQ9NZH0 403 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
VRK3-209ENST00000594948 ZNF229Q9UJW7 825 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 SAMHD1Q9Y3Z3 626 aaKnown RBP12.87□□□□□ -0.35
VRK3-209ENST00000594948 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
VRK3-209ENST00000594948 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 MYO1GB0I1T2 1018 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 CLIC1O00299 241 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 GPR39O43194 453 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 NUAK1O60285 661 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 ITGB6P18564 788 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 PRPS1L1P21108 318 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 S100A1P23297 94 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 KIR3DL1P43629 444 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 GSSP48637 474 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
VRK3-209ENST00000594948 SGSHP51688 502 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 RHOAP61586 193 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 RPP38P78345 283 aaKnown RBP12.86□□□□□ -0.35
VRK3-209ENST00000594948 VLDLRP98155 873 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 DGCR6Q14129 220 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 PTPRRQ15256 657 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 ADGRF1Q5T601 910 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 C1QTNF12Q5T7M4 302 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 FAM151BQ6UXP7 276 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 DSG4Q86SJ6 1040 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 AMER2Q8N7J2 671 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 APH1BQ8WW43 257 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 RAD9AQ99638 391 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 FAM120CQ9NX05 1096 aaKnown RBP12.86□□□□□ -0.35
VRK3-209ENST00000594948 THUMPD1Q9NXG2 353 aaKnown RBP12.86□□□□□ -0.35
VRK3-209ENST00000594948 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 NOD1Q9Y239 953 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 TSC22D4Q9Y3Q8 395 aa12.86□□□□□ -0.35
VRK3-209ENST00000594948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 AGAP14A8MT82 685 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 AIREO43918 545 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ADAMTS4O75173 837 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 STC2O76061 302 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms