RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KCNF1Q9H3M0 494 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 WDR54Q9H977 334 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 MRPS30Q9NP92 439 aaKnown RBP22.46■■□□□ 1.19
LSM4-204ENST00000594828 ASIC3Q9UHC3 531 aa22.46■■□□□ 1.19
LSM4-204ENST00000594828 ASH1LQ9NR48 2969 aaKnown RBP22.46■■□□□ 1.19
LSM4-204ENST00000594828 OR2A25A4D2G3 310 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 ZNF839A8K0R7 811 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 EIF2S1P05198 315 aaKnown RBP22.45■■□□□ 1.18
LSM4-204ENST00000594828 MPC1LP0DKB6 136 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 ENO3P13929 434 aaPredicted RBP22.45■■□□□ 1.18
LSM4-204ENST00000594828 OR1D4P47884 311 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 PNLIPRP1P54315 467 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 MPP1Q00013 466 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 NKG7Q16617 165 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 PCGF5Q86SE9 256 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 KCNMB4Q86W47 210 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 FBXO15Q8NCQ5 510 aaPredicted RBP22.45■■□□□ 1.18
LSM4-204ENST00000594828 ASB11Q8WXH4 323 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 NACC2Q96BF6 587 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 GPR21Q99679 349 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 ZFYVE21Q9BQ24 234 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 FAM167BQ9BTA0 163 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 SLC26A1Q9H2B4 701 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 SLC6A20Q9NP91 592 aa22.45■■□□□ 1.18
LSM4-204ENST00000594828 IARS2Q9NSE4 1012 aaKnown RBP22.45■■□□□ 1.18
LSM4-204ENST00000594828 DNALI1O14645 258 aaPredicted RBP22.44■■□□□ 1.18
LSM4-204ENST00000594828 ZBTB14O43829 449 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 UBR5O95071 2799 aaPredicted RBP22.44■■□□□ 1.18
LSM4-204ENST00000594828 SLC16A8O95907 504 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 SYF2O95926 243 aaKnown RBP22.44■■□□□ 1.18
LSM4-204ENST00000594828 TCP1P17987 556 aaKnown RBP22.44■■□□□ 1.18
LSM4-204ENST00000594828 PGAM1P18669 254 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 MMP11P24347 488 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 JMJD6Q6NYC1 403 aaPredicted RBP22.44■■□□□ 1.18
LSM4-204ENST00000594828 CYHR1Q6ZMK1 362 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 COX15Q7KZN9 410 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 SPNS2Q8IVW8 549 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 GALNT16Q8N428 558 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 METTL27Q8N6F8 245 aaPredicted RBP22.44■■□□□ 1.18
LSM4-204ENST00000594828 EFCAB3Q8N7B9 438 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 CPT1CQ8TCG5 803 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 PLCD4Q9BRC7 762 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 MFRPQ9BY79 579 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 ATP13A2Q9NQ11 1180 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 C5AR2Q9P296 337 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 ANKMY1Q9P2S6 941 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 MAU2Q9Y6X3 613 aa22.44■■□□□ 1.18
LSM4-204ENST00000594828 GFYI3L273 518 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 AGPSO00116 658 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 KLHL41O60662 606 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 VPS26AO75436 327 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 PRDX1Q06830 199 aaKnown RBP22.43■■□□□ 1.18
LSM4-204ENST00000594828 PTK6Q13882 451 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 UBAP2LQ14157 1087 aaKnown RBP22.43■■□□□ 1.18
LSM4-204ENST00000594828 MYBPC3Q14896 1274 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 VWA5B1Q5TIE3 1220 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 ICE2Q659A1 982 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 PPFIBP2Q8ND30 876 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 CD200R1Q8TD46 325 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 ZNF480Q8WV37 535 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 SLCO2A1Q92959 643 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 COL26A1Q96A83 441 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 SPSB2Q99619 263 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 AARSD1Q9BTE6 412 aaKnown RBP22.43■■□□□ 1.18
LSM4-204ENST00000594828 ZNF304Q9HCX3 659 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 UTP6Q9NYH9 597 aaKnown RBP22.43■■□□□ 1.18
LSM4-204ENST00000594828 TAC3Q9UHF0 121 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 PCYOX1Q9UHG3 505 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 CDC23Q9UJX2 597 aa22.43■■□□□ 1.18
LSM4-204ENST00000594828 NXT1Q9UKK6 140 aaKnown RBP22.43■■□□□ 1.18
LSM4-204ENST00000594828 FLNBO75369 2602 aaKnown RBP22.43■■□□□ 1.18
LSM4-204ENST00000594828 E7ENX8 843 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 H0YGG7 62 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 MASP2O00187 686 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 SORBS2O94875 1100 aaKnown RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 CCNDBP1O95273 360 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 TTC4O95801 387 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 ERVK-10P10266 1014 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 ARF3P61204 181 aaPredicted RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 TAP2Q03519 686 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 DHX9Q08211 1270 aaKnown RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 CRYMQ14894 314 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 PRMT9Q6P2P2 845 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 CPNE9Q8IYJ1 553 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 DTWD1Q8N5C7 304 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 RBMXL3Q8N7X1 1067 aaKnown RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 C2CD4AQ8NCU7 369 aaPredicted RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 GABPB2Q8TAK5 448 aaPredicted RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 EBNA1BP2Q99848 306 aaKnown RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 SOX17Q9H6I2 414 aaPredicted RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 SLAMF7Q9NQ25 335 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 ABCF3Q9NUQ8 709 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 STOX2Q9P2F5 926 aaPredicted RBP22.42■■□□□ 1.18
LSM4-204ENST00000594828 CTSFQ9UBX1 484 aa22.42■■□□□ 1.18
LSM4-204ENST00000594828 IGKV1-8A0A0C4DH67 115 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 SMAPO00193 183 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 VPS4BO75351 444 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 MED26O95402 600 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 ALPPP05187 535 aa22.41■■□□□ 1.18
LSM4-204ENST00000594828 SOX8P57073 446 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms