RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 FREM2Q5SZK8 3169 aa24.77■■□□□ 1.56
TRIM28-204ENST00000594806 WDFY3Q8IZQ1 3526 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 KLK10O43240 276 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 RAD1O60671 282 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 KRT37O76014 449 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 LTA4HP09960 611 aaKnown RBP24.76■■□□□ 1.55
TRIM28-204ENST00000594806 TYK2P29597 1187 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 UCNP55089 124 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 TBPL1P62380 186 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 TSNQ15631 228 aaKnown RBP24.76■■□□□ 1.55
TRIM28-204ENST00000594806 PRAMEF13Q5VWM6 474 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 FCRL6Q6DN72 434 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 PWWP2BQ6NUJ5 590 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 TMEM126BQ8IUX1 230 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 FAM20CQ8IXL6 584 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 OR56A3Q8NH54 315 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 UHMK1Q8TAS1 419 aaKnown RBP24.76■■□□□ 1.55
TRIM28-204ENST00000594806 DCAKDQ8WVC6 231 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 ISL2Q96A47 359 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 KIAA1191Q96A73 305 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 NAF1Q96HR8 494 aaKnown RBP24.76■■□□□ 1.55
TRIM28-204ENST00000594806 DPH7Q9BTV6 452 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 DHRS4Q9BTZ2 278 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 ACAT2Q9BWD1 397 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 SGPP1Q9BX95 441 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 SNX15Q9NRS6 342 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 SNX7Q9UNH6 387 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 AP1M2Q9Y6Q5 423 aa24.76■■□□□ 1.55
TRIM28-204ENST00000594806 OR2A25A4D2G3 310 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 E7EQ34 232 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 SCRG1O75711 98 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 KIAA0754O94854 1291 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 GUCA1CO95843 209 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 C2P06681 752 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 HBQ1P09105 142 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 NAE1Q13564 534 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 BMPR2Q13873 1038 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 TLDC1Q6P9B6 456 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 ADGRD1Q6QNK2 874 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 LCTLQ6UWM7 567 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 MBOAT1Q6ZNC8 495 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 OR1L3Q8NH93 324 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 NKD1Q969G9 470 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 HAUS8Q9BT25 410 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 ATG10Q9H0Y0 220 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 PPCSQ9HAB8 311 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 ENAMQ9NRM1 1142 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 EURLQ9NYK6 297 aa24.75■■□□□ 1.55
TRIM28-204ENST00000594806 SEC16AO15027 2179 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 SRPX2O60687 465 aaPredicted RBP24.74■■□□□ 1.55
TRIM28-204ENST00000594806 CPNE3O75131 537 aaKnown RBP24.74■■□□□ 1.55
TRIM28-204ENST00000594806 TUBBP07437 444 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 VSNL1P62760 191 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 ABHD18Q0P651 414 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 FAM83EQ2M2I3 478 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 TCTE1Q5JU00 501 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 C6orf15Q6UXA7 325 aaPredicted RBP24.74■■□□□ 1.55
TRIM28-204ENST00000594806 GPSM1Q86YR5 675 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 MCATQ8IVS2 390 aaKnown RBP24.74■■□□□ 1.55
TRIM28-204ENST00000594806 CACNA2D3Q8IZS8 1091 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 TCAIMQ8N3R3 496 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 STAG3L4Q8TBR4 150 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 MTBPQ96DY7 904 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 MED8Q96G25 268 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 LRFN5Q96NI6 719 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 PLCD4Q9BRC7 762 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 EPB41L4BQ9H329 900 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 KLHL20Q9Y2M5 609 aa24.74■■□□□ 1.55
TRIM28-204ENST00000594806 A0A096LPK6 155 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 OR2B3O76000 313 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 ALDOAP04075 364 aaKnown RBP24.73■■□□□ 1.55
TRIM28-204ENST00000594806 SNRPAP09012 282 aaKnown RBP24.73■■□□□ 1.55
TRIM28-204ENST00000594806 CCNYL3P0C7X3 344 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 ZNF28P17035 718 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 MAGEA12P43365 314 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 TLE3Q04726 772 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 TGFBIQ15582 683 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 ZNF425Q6IV72 752 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 IL22RA1Q8N6P7 574 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 EGFL8Q99944 293 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 EFHD1Q9BUP0 239 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 SLC6A20Q9NP91 592 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 TMEM184CQ9NVA4 438 aa24.73■■□□□ 1.55
TRIM28-204ENST00000594806 TIAF1O95411 115 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 EZRP15311 586 aaKnown RBP24.72■■□□□ 1.55
TRIM28-204ENST00000594806 MANEAQ5SRI9 462 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 KLC3Q6P597 504 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 EMBQ6PCB8 327 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 RNF44Q7L0R7 432 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 ISCA2Q86U28 154 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 C17orf64Q86WR6 236 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 SPATA6LQ8N4H0 392 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 RHEBL1Q8TAI7 183 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 UBLCP1Q8WVY7 318 aaPredicted RBP24.72■■□□□ 1.55
TRIM28-204ENST00000594806 CABS1Q96KC9 395 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 CCNL2Q96S94 520 aaPredicted RBP24.72■■□□□ 1.55
TRIM28-204ENST00000594806 ZFYVE21Q9BQ24 234 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 IGSF5Q9NSI5 407 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 PADI1Q9ULC6 663 aa24.72■■□□□ 1.55
TRIM28-204ENST00000594806 DMXL2Q8TDJ6 3036 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms