RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	INTS7	Q9NVH2	962 aa	Known RBP	11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	TAC3	Q9UHF0	121 aa		11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	PILRA	Q9UKJ1	303 aa		11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	SSUH2	Q9Y2M2	353 aa		11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.23	□□□□□ -0.61
RANBP3-228	ENST00000592621	ZZEF1	O43149	2961 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	CTSV	O60911	334 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	KRT37	O76014	449 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	KLHL2	O95198	593 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	CTSB	P07858	339 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ANXA5	P08758	320 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	NUDT17	P0C025	328 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	NPPB	P16860	134 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	TFEB	P19484	476 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	CCND1	P24385	295 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	CMPK1	P30085	196 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	GGT5	P36269	586 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	SLC6A12	P48065	614 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	HNMT	P50135	292 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	KNTC1	P50748	2209 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ABAT	P80404	500 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	NAE1	Q13564	534 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	RASA2	Q15283	850 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	TAF1B	Q53T94	588 aa	Predicted RBP	11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	CDKL4	Q5MAI5	379 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PRAMEF13	Q5VWM6	474 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PWWP2B	Q6NUJ5	590 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	LCTL	Q6UWM7	567 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	RNF44	Q7L0R7	432 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	TIPARP	Q7Z3E1	657 aa	Known RBP	11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PAQR7	Q86WK9	346 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ZFAND4	Q86XD8	727 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PLD6	Q8N2A8	252 aa	Known RBP	11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	MREG	Q8N565	214 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PDPR	Q8NCN5	879 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ZNF248	Q8NDW4	579 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	OR8K5	Q8NH50	307 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	OR1L3	Q8NH93	324 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	RHEBL1	Q8TAI7	183 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ATL1	Q8WXF7	558 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PYCR2	Q96C36	320 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	MTBP	Q96DY7	904 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ZNF285	Q96NJ3	590 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	FCRL4	Q96PJ5	515 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PLCD4	Q9BRC7	762 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	TMEM79	Q9BSE2	394 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	DPH7	Q9BTV6	452 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ALG9	Q9H6U8	611 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	SYNPO2L	Q9H987	977 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	MRPS30	Q9NP92	439 aa	Known RBP	11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ANKMY1	Q9P2S6	941 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	TLK1	Q9UKI8	766 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	RARRES3	Q9UL19	164 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	ZMIZ1	Q9ULJ6	1067 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	SH2B3	Q9UQQ2	575 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621	RAX	Q9Y2V3	346 aa		11.22	□□□□□ -0.61
RANBP3-228	ENST00000592621		A0A087WV48	116 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	CCDC189	A1A4V9	331 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	TMEM150C	B9EJG8	249 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	STMND1	H3BQB6	276 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	TAPBP	O15533	448 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	KERA	O60938	352 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	STK17B	O94768	372 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	CCNDBP1	O95273	360 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	TUBB	P07437	444 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	LIPC	P11150	499 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	MTHFD2	P13995	350 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	GCGR	P47871	477 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	RELA	Q04206	551 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	CLN3	Q13286	438 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	TSTA3	Q13630	321 aa	Predicted RBP	11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	NAA25	Q14CX7	972 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	ACAP2	Q15057	778 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	FAM83E	Q2M2I3	478 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	DEFB110	Q30KQ9	67 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	C18orf21	Q32NC0	220 aa	Predicted RBP	11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	PTCHD3	Q3KNS1	767 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	TECRL	Q5HYJ1	363 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	LGSN	Q5TDP6	509 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	FBXO42	Q6P3S6	717 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	FRA10AC1	Q70Z53	315 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	GPSM1	Q86YR5	675 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	CNPY4	Q8N129	248 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	STAG3L4	Q8TBR4	150 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	MED8	Q96G25	268 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	CCDC77	Q9BR77	488 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	PCBD2	Q9H0N5	130 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	VPS11	Q9H270	941 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	PPCS	Q9HAB8	311 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	ZNF358	Q9NW07	568 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	PTBP2	Q9UKA9	531 aa	Known RBP	11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	PLCL2	Q9UPR0	1127 aa		11.21	□□□□□ -0.61
RANBP3-228	ENST00000592621	SNRNP200	O75643	2136 aa	Known RBP	11.2	□□□□□ -0.62
RANBP3-228	ENST00000592621	IQANK1	A0A1B0GTG1	560 aa		11.2	□□□□□ -0.62
RANBP3-228	ENST00000592621	PABPN1L	A6NDY0	278 aa	Known RBP	11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms