RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 CENPXA8MT69 81 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 AP2A2O94973 939 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 OAZ2O95190 189 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 BCKDHAP12694 445 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 LAG3P18627 525 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 MAPK12P53778 367 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 MADCAM1Q13477 382 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 DNASE1L3Q13609 305 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 CHERPQ8IWX8 916 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 AIF1LQ9BQI0 150 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 SLC35G4P0C7Q5 338 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 CDK4P11802 303 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 PPM1AP35813 382 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 KIAA1614Q5VZ46 1190 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 TMEM236Q5W0B7 351 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 CES4AQ5XG92 561 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 TPGS2Q68CL5 300 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 DCAF4L2Q8NA75 395 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 CD99L2Q8TCZ2 262 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 TRIM63Q969Q1 353 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 ARNT2Q9HBZ2 717 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 WASH4PA8MWX3 477 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 ACOT8O14734 319 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 CCNYL3P0C7X3 344 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 HNF1BP35680 557 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 MXD1Q05195 221 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 FOXB2Q5VYV0 432 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 AP3S1Q92572 193 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 PAWRQ96IZ0 340 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 MTIF3Q9H2K0 278 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 ERVK-18Q9QC07 812 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 A0A096LPI6 279 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 H3BMQ9 156 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 SSR2P43308 183 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 CENPAP49450 140 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 AP1S2P56377 157 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 SCML4Q8N228 414 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 DTWD1Q8N5C7 304 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 COG8Q96MW5 612 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 RIOK2Q9BVS4 552 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 PTGFRNQ9P2B2 879 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 SATB2Q9UPW6 733 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
SMARCA4-215ENST00000590574 SMCHD1A6NHR9 2005 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 ZNF195O14628 629 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 CA12O43570 354 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 ACRV1P26436 265 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 TAB1Q15750 504 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 SNAPC1Q16533 368 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 TPRG1Q6ZUI0 275 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 SLC22A16Q86VW1 577 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 VILLO15195 856 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 INMTO95050 263 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 ARRB2P32121 409 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 GRIA2P42262 883 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 BDKRB1P46663 353 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 OTUD1Q5VV17 481 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 DPP10Q8N608 796 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 ZBTB8BQ8NAP8 495 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 OR8D1Q8WZ84 308 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 TMEM175Q9BSA9 504 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 ZNF221Q9UK13 617 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 GPR45Q9Y5Y3 372 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 TPST2O60704 377 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 TGFB1P01137 390 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 CARM1Q86X55 608 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 EGFL6Q8IUX8 553 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 CD200R1Q8TD46 325 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 UBXN10Q96LJ8 280 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 BOLA2-SMG1P6H3BVE0 249 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 RPS17P08708 135 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 DPP6P42658 865 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 PNLIPRP1P54315 467 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 TNFAIP8L2Q6P589 184 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 RETREG3Q86VR2 466 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 MGME1Q9BQP7 344 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 RHBGQ9H310 441 aa16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 THG1LQ9NWX6 298 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-215ENST00000590574 A0A1W2PRU2 124 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 CARNS1A5YM72 827 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 FGBP02675 491 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 NFATC3Q12968 1075 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 RCAN2Q14206 197 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 LHPPQ9H008 270 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 SPRTNQ9H040 489 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 GABRQQ9UN88 632 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 ZNF232Q9UNY5 417 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 OAS3Q9Y6K5 1087 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 CASKO14936 926 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 SLC5A2P31639 672 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 APLP1P51693 650 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 PON2Q15165 354 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 MORN1Q5T089 497 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 BORAQ6PGQ7 559 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 GDPD4Q6W3E5 623 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
SMARCA4-215ENST00000590574 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms