RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZBTB14O43829 449 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 SYF2O95926 243 aaKnown RBP17.47■□□□□ 0.39
DDX39A-212ENST00000590260 PTPN4P29074 926 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 FOXL2P58012 376 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 ERV3-1Q14264 604 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 C1orf189Q5VU69 101 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 ZNF425Q6IV72 752 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 C8orf74Q6P047 294 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 PAQR7Q86WK9 346 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 GABPB2Q8TAK5 448 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-212ENST00000590260 ANKRD49Q8WVL7 239 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 DPH7Q9BTV6 452 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 CUEDC1Q9NWM3 386 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-212ENST00000590260 KCND3Q9UK17 655 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 MTO1Q9Y2Z2 717 aaKnown RBP17.47■□□□□ 0.39
DDX39A-212ENST00000590260 PCM1Q15154 2024 aa17.47■□□□□ 0.39
DDX39A-212ENST00000590260 MAP3K7O43318 606 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 ZNF37AP17032 561 aaPredicted RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 MAGEA4P43358 317 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 SNRPNP63162 240 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 CAV1Q03135 178 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 PRDX1Q06830 199 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 PDAP1Q13442 181 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 DEFB109BQ30KR1 87 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 ICE2Q659A1 982 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 CYS1Q717R9 158 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 PALM2Q8IXS6 379 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 GPR135Q8IZ08 494 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 ZNF843Q8N446 348 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 RAB42Q8N4Z0 105 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 ADAMTS17Q8TE56 1095 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 PDLIM5Q96HC4 596 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 VPS39Q96JC1 886 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 GPR87Q9BY21 358 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 RHOJQ9H4E5 214 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 INTS7Q9NVH2 962 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 FARSAQ9Y285 508 aaKnown RBP17.46■□□□□ 0.39
DDX39A-212ENST00000590260 CFAP46Q8IYW2 2715 aa17.46■□□□□ 0.39
DDX39A-212ENST00000590260 A0A0J9YVX5 310 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 FITM1A5D6W6 292 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 SLC16A5O15375 505 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 KLF7O75840 302 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-212ENST00000590260 FAM155BO75949 473 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 RECKO95980 971 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 KLK3P07288 261 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-212ENST00000590260 C8GP07360 202 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 RAB40ALP0C0E4 278 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 ECHS1P30084 290 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 CMPK1P30085 196 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 RPA3P35244 121 aaPredicted RBP17.45■□□□□ 0.38
DDX39A-212ENST00000590260 GMPRP36959 345 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 HSD17B2P37059 387 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 RGS4P49798 205 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 IL2P60568 153 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 TBPL1P62380 186 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 SP140Q13342 867 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 EFTUD2Q15029 972 aaKnown RBP eCLIP17.45■□□□□ 0.386e-7■■■■□ 25.2
DDX39A-212ENST00000590260 PPP1R3AQ16821 1122 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 LRRC8EQ6NSJ5 796 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 TLDC1Q6P9B6 456 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 SBSNQ6UWP8 590 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 C3orf62Q6ZUJ4 267 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 CCDC25Q86WR0 208 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 MYO1HQ8N1T3 1032 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 MED8Q96G25 268 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 PLCD4Q9BRC7 762 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 NLNQ9BYT8 704 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 CAB39LQ9H9S4 337 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 PARVBQ9HBI1 364 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 MRPS30Q9NP92 439 aaKnown RBP17.45■□□□□ 0.38
DDX39A-212ENST00000590260 AP1M2Q9Y6Q5 423 aa17.45■□□□□ 0.38
DDX39A-212ENST00000590260 CDC14CA4D256 554 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 CDC7O00311 574 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 SAT1P21673 171 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 VSX2P58304 361 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-212ENST00000590260 TSTA3Q13630 321 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-212ENST00000590260 SLC9A5Q14940 896 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 NCF4Q15080 339 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 KBTBD12Q3ZCT8 623 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 ZC3H12BQ5HYM0 836 aaKnown RBP17.44■□□□□ 0.38
DDX39A-212ENST00000590260 BORAQ6PGQ7 559 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 AGTRAPQ6RW13 159 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 ARHGEF39Q8N4T4 335 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-212ENST00000590260 N4BP2L2Q92802 583 aaPredicted RBP17.44■□□□□ 0.38
DDX39A-212ENST00000590260 CCDC138Q96M89 665 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 RBBP8Q99708 897 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 SGPP1Q9BX95 441 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 ATG10Q9H0Y0 220 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 ABCF3Q9NUQ8 709 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 TCFL5Q9UL49 500 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 KCNMB2Q9Y691 235 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 BOD1L1Q8NFC6 3051 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 HEATR5BQ9P2D3 2071 aa17.44■□□□□ 0.38
DDX39A-212ENST00000590260 HAT1O14929 419 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 ONECUT2O95948 504 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 HBQ1P09105 142 aa17.43■□□□□ 0.38
DDX39A-212ENST00000590260 POLE2P56282 527 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms