RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CATP04040 527 aaKnown RBP13.74□□□□□ -0.21
MBD1-220ENST00000589758 ITGAXP20702 1163 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 MCM3P25205 808 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 PSMB5P28074 263 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 VSX2P58304 361 aaPredicted RBP13.74□□□□□ -0.21
MBD1-220ENST00000589758 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
MBD1-220ENST00000589758 PTK6Q13882 451 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 ARHGAP19Q14CB8 494 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 NEPROQ6NW34 567 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 PRMT9Q6P2P2 845 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 COX15Q7KZN9 410 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 RNF44Q7L0R7 432 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 MCUQ8NE86 351 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 RUNDC3BQ96NL0 473 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 TRIM51Q9BSJ1 452 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 LRRC4CQ9HCJ2 640 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 UTP6Q9NYH9 597 aaKnown RBP13.74□□□□□ -0.21
MBD1-220ENST00000589758 KLHL42Q9P2K6 505 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 CDC23Q9UJX2 597 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 B3GNT3Q9Y2A9 372 aa13.74□□□□□ -0.21
MBD1-220ENST00000589758 ANKRD12Q6UB98 2062 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 A0A0J9YVX5 310 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 A0A1W2PPV9 198 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 HYKKA2RU49 373 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 TTI1O43156 1089 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 CTSVO60911 334 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 URI1O94763 535 aaPredicted RBP13.73□□□□□ -0.21
MBD1-220ENST00000589758 AGFG2O95081 481 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 ERGP11308 486 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 THOC5Q13769 683 aaKnown RBP13.73□□□□□ -0.21
MBD1-220ENST00000589758 DHX34Q14147 1143 aaKnown RBP13.73□□□□□ -0.21
MBD1-220ENST00000589758 KLHL38Q2WGJ6 581 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 PLEKHN1Q494U1 663 aaPredicted RBP13.73□□□□□ -0.21
MBD1-220ENST00000589758 NEK10Q6ZWH5 1172 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 CENPUQ71F23 418 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 CAND1Q86VP6 1230 aaKnown RBP13.73□□□□□ -0.21
MBD1-220ENST00000589758 LMNTD2Q8IXW0 634 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 PPIL6Q8IXY8 311 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 IQCKQ8N0W5 287 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 ZADH2Q8N4Q0 377 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 SMPDL3AQ92484 453 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 SLCO2A1Q92959 643 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 PSMG3-AS1Q96PY0 264 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 SPSB2Q99619 263 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 ZFYVE21Q9BQ24 234 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 DPH7Q9BTV6 452 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 TRIM31Q9BZY9 425 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 CCDC68Q9H2F9 335 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 ZNF304Q9HCX3 659 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 LUZP4Q9P127 313 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 MAP10Q9P2G4 905 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 ZC3H7BQ9UGR2 993 aaKnown RBP13.73□□□□□ -0.21
MBD1-220ENST00000589758 NBASA2RRP1 2371 aa13.73□□□□□ -0.21
MBD1-220ENST00000589758 NUP210LQ5VU65 1888 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 BLACEA4D250 179 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 OR2A25A4D2G3 310 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 KRT87PA6NCN2 255 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 VSTM2BA6NLU5 285 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 MYO1CO00159 1063 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 DNALI1O14645 258 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 VPS26AO75436 327 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 USP1O94782 785 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 CCNDBP1O95273 360 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ERVK-10P10266 1014 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ITGA3P26006 1051 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 RPA3P35244 121 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 CARSP49589 748 aaKnown RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 EMP3P54852 163 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 FOXL2P58012 376 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 OCA2Q04671 838 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 FASTKQ14296 549 aaKnown RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 MUM1Q2TAK8 710 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 TUBB8Q3ZCM7 444 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ACSBG2Q5FVE4 666 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 IRAK1BP1Q5VVH5 260 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 PRAMEF13Q5VWM6 474 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ZNF470Q6ECI4 717 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 SYDE1Q6ZW31 735 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 NAT8LQ8N9F0 302 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 CALML6Q8TD86 181 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 ZNF669Q96BR6 464 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 FAM136AQ96C01 138 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ACAT2Q9BWD1 397 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 SLC6A20Q9NP91 592 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 MRPS30Q9NP92 439 aaKnown RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 CUEDC1Q9NWM3 386 aaPredicted RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 GALPQ9UBC7 116 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 TSR3Q9UJK0 312 aaKnown RBP13.72□□□□□ -0.21
MBD1-220ENST00000589758 FBXL4Q9UKA2 621 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 CDC14AQ9UNH5 594 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 HS3ST3B1Q9Y662 390 aa13.72□□□□□ -0.21
MBD1-220ENST00000589758 COMMD10Q9Y6G5 202 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms