RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PIP5K1AQ99755 562 aa7.62□□□□□ -1.19
ATG4D-210ENST00000588972 DEC1Q9P2X7 70 aa7.62□□□□□ -1.19
ATG4D-210ENST00000588972 STOML2Q9UJZ1 356 aa7.62□□□□□ -1.19
ATG4D-210ENST00000588972 STAP1Q9ULZ2 295 aa7.62□□□□□ -1.19
ATG4D-210ENST00000588972 SNX10Q9Y5X0 201 aa7.62□□□□□ -1.19
ATG4D-210ENST00000588972 SPTA1P02549 2419 aa7.62□□□□□ -1.19
ATG4D-210ENST00000588972 ATMQ13315 3056 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 KNL1Q8NG31 2342 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 A0A087WV48 116 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SIGLEC16A6NMB1 481 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 MEI4A8MW99 385 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 KCNU1A8MYU2 1149 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 VILLO15195 856 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 TBL1XO60907 577 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 RTN2O75298 545 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 TPM1P09493 284 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 ZNF883P0CG24 379 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 NR2F6P10588 404 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 KRT3P12035 628 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 GZMAP12544 262 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CYP4B1P13584 511 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 COX7A2P14406 83 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 PDGFRAP16234 1089 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 GPD1P21695 349 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SDC4P31431 198 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 HNRNPH3P31942 346 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CCR1P32246 355 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CXCR3P49682 368 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 NUMBP49757 651 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SLC37A1P57057 533 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 RPS24P62847 133 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SLC25A3Q00325 362 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 GAB1Q13480 694 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SLC25A52Q3SY17 297 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 GXYLT1Q4G148 440 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 MS4A13Q5J8X5 152 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 NAPEPLDQ6IQ20 393 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 MTFR2Q6P444 385 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 USP51Q70EK9 711 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 BNIPLQ7Z465 357 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 LGI2Q8N0V4 545 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CCDC185Q8N715 623 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 ATP6V0D2Q8N8Y2 350 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 OR8K1Q8NGG5 319 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SETD7Q8WTS6 366 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 FAM172AQ8WUF8 416 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 RAB40AQ8WXH6 277 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 AKAP1Q92667 903 aaKnown RBP eCLIP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 ARHGEF26Q96DR7 871 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 ERLEC1Q96DZ1 483 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 BTN2A3PQ96KV6 586 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 XPO6Q96QU8 1125 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CHP1Q99653 195 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 PRMT1Q99873 361 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 GABRG3Q99928 467 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 TRIM31Q9BZY9 425 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 TRIM7Q9C029 511 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 TKTL2Q9H0I9 626 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 WDR35Q9P2L0 1181 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 NFKBIL1Q9UBC1 381 aaPredicted RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CNOT8Q9UFF9 292 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 TESQ9UGI8 421 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 FZD4Q9ULV1 537 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 NENFQ9UMX5 172 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 B3GNT3Q9Y2A9 372 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 SNX8Q9Y5X2 465 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 BZW2Q9Y6E2 419 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 CABIN1Q9Y6J0 2220 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 NYNRINQ9P2P1 1898 aaKnown RBP7.61□□□□□ -1.19
ATG4D-210ENST00000588972 HECTD1Q9ULT8 2610 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 MYO18BQ8IUG5 2567 aa7.61□□□□□ -1.19
ATG4D-210ENST00000588972 AKR1B15C9JRZ8 316 aaPredicted RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 F5H5T6 163 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 FLRT2O43155 660 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CISD3P0C7P0 127 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ITGAMP11215 1152 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 NFKBIAP25963 317 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 HLA-FP30511 346 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 SLC8A1P32418 973 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ACSL1P33121 698 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 PTPN9P43378 593 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ABCG1P45844 678 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 MTNR1AP48039 350 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 HDAC4P56524 1084 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 EFNB1P98172 346 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CHAF1BQ13112 559 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 MPPE1Q53F39 396 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CCDC122Q5T0U0 273 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 TMEM215Q68D42 235 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 PLEKHA7Q6IQ23 1121 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 DCUN1D2Q6PH85 259 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 IL27RAQ6UWB1 636 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 KIRREL2Q6UWL6 708 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 GALNT7Q86SF2 657 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 VPS36Q86VN1 386 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CNGA4Q8IV77 575 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ADGRF3Q8IZF5 1079 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 CARNMT1Q8N4J0 409 aa7.6□□□□□ -1.19
ATG4D-210ENST00000588972 ZCCHC9Q8N567 271 aaKnown RBP7.6□□□□□ -1.19
ATG4D-210ENST00000588972 PLD5Q8N7P1 536 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms