RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 RSRC1Q96IZ7 334 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 FRG2BQ96QU4 278 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 OR4K3Q96R72 315 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 MYOCQ99972 504 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 HOPXQ9BPY8 73 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 GPATCH1Q9BRR8 931 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 SLC17A9Q9BYT1 436 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 DPY30Q9C005 99 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 OR52A5Q9H2C5 316 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 KCNK12Q9HB15 430 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PREBQ9HCU5 417 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 FZD3Q9NPG1 666 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TRPV5Q9NQA5 729 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 ITM2CQ9NQX7 267 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TM7SF3Q9NS93 570 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 INTS7Q9NVH2 962 aaKnown RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 GPRC5BQ9NZH0 403 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TMEM181Q9P2C4 612 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PLAGL1Q9UM63 463 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 PSMD13Q9UNM6 376 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 NCKAP1Q9Y2A7 1128 aa8.49□□□□□ -1.05
SMAD4-206ENST00000588860 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-206ENST00000588860 TP53BP1Q12888 1972 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 DYTNA2CJ06 578 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PRORSD1PA6NEY8 169 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 GPR89AB7ZAQ6 455 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 FXYD1O00168 92 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 NME4O00746 187 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ACOT8O14734 319 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ANKRD28O15084 1053 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 NVLO15381 856 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 NARSO43776 548 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 STAMBPO95630 424 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 RPN2P04844 631 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SLC35G4P0C7Q5 338 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 GPR89BP0CG08 455 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ACADMP11310 421 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 BCKDHAP12694 445 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ACP5P13686 325 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 CD22P20273 847 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 KELP23276 732 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PRPH2P23942 346 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 VARSP26640 1264 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 MAPK1P28482 360 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 GCKP35557 465 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 HNF4AP41235 474 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 DGKQP52824 942 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PNLIPRP1P54315 467 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PPP2CBP62714 309 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PPP2CAP67775 309 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 TRAP1Q12931 704 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 CSTF3Q12996 717 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PTGR1Q14914 329 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 TLR1Q15399 786 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 MUM1Q2TAK8 710 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PAGE3Q5JUK9 113 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 EOGTQ5NDL2 527 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SUSD1Q6UWL2 747 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 DHDDSQ86SQ9 333 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 TMPRSS11BQ86T26 416 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SPATA24Q86W54 205 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 DCUN1D3Q8IWE4 304 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 RNF175Q8N4F7 328 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 MINDY1Q8N5J2 469 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 LMNTD1Q8N9Z9 388 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PHC3Q8NDX5 983 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PRSS33Q8NF86 280 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 OR5AR1Q8NGP9 310 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 CLHC1Q8NHS4 586 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 RPLP0P6Q8NHW5 317 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 NRG4Q8WWG1 115 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 TMEM125Q96AQ2 219 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ASB9Q96DX5 294 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 IL17FQ96PD4 163 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 EBPLQ9BY08 206 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 PCDHAC1Q9H158 963 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ACTL8Q9H568 366 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SGK2Q9HBY8 427 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 CCDC177Q9NQR7 707 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 CMTM6Q9NX76 183 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 GMPR2Q9P2T1 348 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 CD300AQ9UGN4 299 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 MOSPD1Q9UJG1 213 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 FZD4Q9ULV1 537 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SCML1Q9UN30 329 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 SH2B3Q9UQQ2 575 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 ASF1AQ9Y294 204 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 TDRKHQ9Y2W6 561 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 KCNE2Q9Y6J6 123 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 TDRD6O60522 2096 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 MDC1Q14676 2089 aaKnown RBP8.48□□□□□ -1.05
SMAD4-206ENST00000588860 BAHCC1Q9P281 2608 aa8.48□□□□□ -1.05
SMAD4-206ENST00000588860 C15orf38-AP3S2A0A0A6YYH1 394 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 TCRBV21S2A2A0A5A6 115 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 KANSL1LA0AUZ9 987 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 KLHL33A6NCF5 533 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 H0YIV9 168 aa8.47□□□□□ -1.05
SMAD4-206ENST00000588860 H3BNX3 289 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms