RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ACTRT2Q8TDY3 377 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 ZFPM2Q8WW38 1151 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 PIGKQ92643 395 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 NRTNQ99748 197 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 SLC40A1Q9NP59 571 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 TMEM74BQ9NUR3 256 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 POT1Q9NUX5 634 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 CPNE7Q9UBL6 633 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 ZFP69BQ9UJL9 534 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 SNX6Q9UNH7 406 aa21.52■■□□□ 1.04
ATG4D-209ENST00000588857 E9PBE3 544 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 KLHL41O60662 606 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 VPS4BO75351 444 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 ULK1O75385 1050 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 SERPINA6P08185 405 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 DOC2AQ14183 400 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 KIF19Q2TAC6 998 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 TCHHL1Q5QJ38 904 aaPredicted RBP21.51■■□□□ 1.03
ATG4D-209ENST00000588857 AMIGO1Q86WK6 493 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 NAGSQ8N159 534 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 SFRP1Q8N474 314 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 LINC01555Q8NAE3 123 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 ZNF548Q8NEK5 533 aaPredicted RBP21.51■■□□□ 1.03
ATG4D-209ENST00000588857 SLC5A11Q8WWX8 675 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 PATE1Q8WXA2 126 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 PTGDR2Q9Y5Y4 395 aa21.51■■□□□ 1.03
ATG4D-209ENST00000588857 ATP6AP2A0A1C7CYW4 349 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 B4DGG1 531 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 MANBAO00462 879 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 FCHO1O14526 889 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 ATP6AP2O75787 350 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 JUPP14923 745 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 NCF2P19878 526 aaPredicted RBP21.5■■□□□ 1.03
ATG4D-209ENST00000588857 HNF4AP41235 474 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 CASP2P42575 452 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 CTSKP43235 329 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SIM2Q14190 667 aaPredicted RBP21.5■■□□□ 1.03
ATG4D-209ENST00000588857 PLCL1Q15111 1095 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 TBCCQ15814 346 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SPDYAQ5MJ70 313 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SLCO4C1Q6ZQN7 724 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 TMPRSS11BQ86T26 416 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SLC9B2Q86UD5 537 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 C17orf64Q86WR6 236 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SYT12Q8IV01 421 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 OR4E2Q8NGC2 313 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SLC37A2Q8TED4 501 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 TUBGCP3Q96CW5 907 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 ERP27Q96DN0 273 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 PTCD3Q96EY7 689 aaKnown RBP21.5■■□□□ 1.03
ATG4D-209ENST00000588857 C3orf30Q96M34 536 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 ACAT2Q9BWD1 397 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SRMSQ9H3Y6 488 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 ELOVL6Q9H5J4 265 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 RIC8BQ9NVN3 520 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 OR6C2Q9NZP2 312 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 TAC3Q9UHF0 121 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 SNX11Q9Y5W9 270 aa21.5■■□□□ 1.03
ATG4D-209ENST00000588857 KCNE1BA0A087WTH5 132 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 YY2O15391 372 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 PRAMEF4O60810 478 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 ANXA6P08133 673 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 UBE2IP63279 158 aaKnown RBP21.49■■□□□ 1.03
ATG4D-209ENST00000588857 ZRSR2Q15696 482 aaKnown RBP21.49■■□□□ 1.03
ATG4D-209ENST00000588857 PRAMEF9Q5VWM5 478 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 GRHL2Q6ISB3 625 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 SCIMPQ6UWF3 145 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 GBP7Q8N8V2 638 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-209ENST00000588857 JPH3Q8WXH2 748 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-209ENST00000588857 NMUR2Q9GZQ4 415 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 MYLK2Q9H1R3 596 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 EHD1Q9H4M9 534 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 RAB23Q9ULC3 237 aa21.49■■□□□ 1.03
ATG4D-209ENST00000588857 EP300Q09472 2414 aaPredicted RBP21.49■■□□□ 1.03
ATG4D-209ENST00000588857 A0A1W2PPV9 198 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 LMO7DNF2Z398 122 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 PIAS2O75928 621 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 C1GALT1C1LP0DN25 315 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 DPP6P42658 865 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 ARRB1P49407 418 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-209ENST00000588857 HTR6P50406 440 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 GPR18Q14330 331 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 ABRAXAS2Q15018 415 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 SGO1Q5FBB7 561 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 PAGE2BQ5JRK9 111 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 ATG9BQ674R7 924 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 NXPE4Q6UWF7 544 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 PRR23BQ6ZRT6 265 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 CLNKQ7Z7G1 428 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 AVL9Q8NBF6 648 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 EFCAB11Q9BUY7 163 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 ZNF490Q9ULM2 529 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-209ENST00000588857 SH2B3Q9UQQ2 575 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 PCDHB11Q9Y5F2 797 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 FAM186AA6NE01 2351 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 SDC3O75056 442 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 VARSP26640 1264 aaKnown RBP21.48■■□□□ 1.03
ATG4D-209ENST00000588857 HIST2H2ACQ16777 129 aaPredicted RBP21.48■■□□□ 1.03
ATG4D-209ENST00000588857 XKR7Q5GH72 579 aa21.48■■□□□ 1.03
ATG4D-209ENST00000588857 CATSPEREQ5SY80 951 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms