RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 ITPR2Q14571 2701 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 A0A0J9YVX5 310 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 HYKKA2RU49 373 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 ARHGEF33A8MVX0 844 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 PFDN6O15212 129 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 SEMA7AO75326 666 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 F7P08709 466 aaPredicted RBP17.95■□□□□ 0.46
TRIM47-205ENST00000587774 PAMP19021 973 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 CHRM3P20309 590 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 AIMP2Q13155 320 aaKnown RBP17.95■□□□□ 0.46
TRIM47-205ENST00000587774 WASHC2DQ5SRD0 308 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 CASC4Q6P4E1 433 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 NACC2Q96BF6 587 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 ZNF669Q96BR6 464 aaPredicted RBP17.95■□□□□ 0.46
TRIM47-205ENST00000587774 SNRNP40Q96DI7 357 aaKnown RBP17.95■□□□□ 0.46
TRIM47-205ENST00000587774 C19orf60Q96EN9 201 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 ACAT2Q9BWD1 397 aa17.95■□□□□ 0.46
TRIM47-205ENST00000587774 LOC105369274A0A096LPK9 316 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 LOC102723532A0A0G2JNH3 316 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 OR2A25A4D2G3 310 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 E5RI56 91 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 KLHL41O60662 606 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 SRPX2O60687 465 aaPredicted RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 PSIP1O75475 530 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 IPO13O94829 963 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 KRT14P02533 472 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 RNF224P0DH78 156 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 PKMP14618 531 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ITGA3P26006 1051 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 SARNPP82979 210 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 KLHL38Q2WGJ6 581 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 FAM214AQ32MH5 1076 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 PRAMEF13Q5VWM6 474 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ARMC3Q5W041 872 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ZNF470Q6ECI4 717 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 NEPROQ6NW34 567 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 SUSD1Q6UWL2 747 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 OR4N4Q8N0Y3 316 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 OR9A1PQ8NGU1 263 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 TM9SF4Q92544 642 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 C10orf90Q96M02 699 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ZFYVE21Q9BQ24 234 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 DPH7Q9BTV6 452 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ILKAPQ9H0C8 392 aaPredicted RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ASF1BQ9NVP2 202 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 INTS10Q9NVR2 710 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 SAMD15Q9P1V8 674 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 ZC3H7BQ9UGR2 993 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 NXT1Q9UKK6 140 aaKnown RBP17.94■□□□□ 0.46
TRIM47-205ENST00000587774 PPP2R2CQ9Y2T4 447 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 CSAG2Q9Y5P2 127 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 POLEQ07864 2286 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 CROCCQ5TZA2 2017 aa17.94■□□□□ 0.46
TRIM47-205ENST00000587774 VSTM2BA6NLU5 285 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 MYO1CO00159 1063 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 EIF2S1P05198 315 aaKnown RBP17.93■□□□□ 0.46
TRIM47-205ENST00000587774 VARSP26640 1264 aaKnown RBP17.93■□□□□ 0.46
TRIM47-205ENST00000587774 CMPK1P30085 196 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 CLCN7P51798 805 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 DHX34Q14147 1143 aaKnown RBP17.93■□□□□ 0.46
TRIM47-205ENST00000587774 EIF2S3LQ2VIR3 472 aaKnown RBP17.93■□□□□ 0.46
TRIM47-205ENST00000587774 ANKRD20A4Q4UJ75 823 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 KIRREL2Q6UWL6 708 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 SPNS2Q8IVW8 549 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 GIMAP7Q8NHV1 300 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 SSC4DQ8WTU2 575 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 MS4A14Q96JA4 679 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 SLC30A3Q99726 388 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 MESP1Q9BRJ9 268 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 SYNPO2LQ9H987 977 aa17.93■□□□□ 0.46
TRIM47-205ENST00000587774 STOX2Q9P2F5 926 aaPredicted RBP17.93■□□□□ 0.46
TRIM47-205ENST00000587774 IGKV1-8A0A0C4DH67 115 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 FAM237BA0A1B0GVD1 139 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 GOLGA8MH3BSY2 632 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 USP1O94782 785 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 ERVK-10P10266 1014 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 CUL1Q13616 776 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 NAA25Q14CX7 972 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 NR6A1Q15406 480 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 RBBP7Q16576 425 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 TUBB8Q3ZCM7 444 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 Q6ZS92 163 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 CUZD1Q86UP6 607 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 DENND6AQ8IWF6 608 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 ZADH2Q8N4Q0 377 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 CISD2Q8N5K1 135 aaKnown RBP17.92■□□□□ 0.46
TRIM47-205ENST00000587774 SERPINB12Q96P63 405 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 CRB3Q9BUF7 120 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 ZNF304Q9HCX3 659 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 MRPS30Q9NP92 439 aaKnown RBP17.92■□□□□ 0.46
TRIM47-205ENST00000587774 FBXO6Q9NRD1 293 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-205ENST00000587774 FAM114A2Q9NRY5 505 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 SEMA3GQ9NS98 782 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 VPS9D1Q9Y2B5 631 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 MED16Q9Y2X0 877 aa17.92■□□□□ 0.46
TRIM47-205ENST00000587774 CATP04040 527 aaKnown RBP17.91■□□□□ 0.46
TRIM47-205ENST00000587774 MLNP12872 115 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 RPA3P35244 121 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-205ENST00000587774 KLC1Q07866 573 aa17.91■□□□□ 0.46
TRIM47-205ENST00000587774 CTBP1Q13363 440 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms