RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, human

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-210	ENST00000587429	OR2A25	A4D2G3	310 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	FITM1	A5D6W6	292 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	SRPX2	O60687	465 aa	Predicted RBP	20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	CAT	P04040	527 aa	Known RBP	20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	ERVK-10	P10266	1014 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	IVD	P26440	423 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	PNLIPRP1	P54315	467 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	CRYM	Q14894	314 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	TTLL9	Q3SXZ7	439 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	NEK10	Q6ZWH5	1172 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	COX15	Q7KZN9	410 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	OVCH1	Q7RTY7	1134 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	KCNMB4	Q86W47	210 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	CALML6	Q8TD86	181 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	AARSD1	Q9BTE6	412 aa	Known RBP	20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	SYNPO2L	Q9H987	977 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	ENAM	Q9NRM1	1142 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	FAM114A2	Q9NRY5	505 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	P4HTM	Q9NXG6	502 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	KLHL42	Q9P2K6	505 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	ZC3H7B	Q9UGR2	993 aa	Known RBP	20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	PCYOX1	Q9UHG3	505 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	MAU2	Q9Y6X3	613 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	SHANK1	Q9Y566	2161 aa		20.68	■□□□□ 0.9
PKN1-210	ENST00000587429	IGKV1-8	A0A0C4DH67	115 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	SLC16A8	O95907	504 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	SYF2	O95926	243 aa	Known RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	ONECUT2	O95948	504 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	EIF2S1	P05198	315 aa	Known RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	CD63	P08962	238 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	TCP1	P17987	556 aa	Known RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	PGAM1	P18669	254 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	CMPK1	P30085	196 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	RPA3	P35244	121 aa	Predicted RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	TIAL1	Q01085	375 aa	Known RBP eCLIP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	YOD1	Q5VVQ6	348 aa	Predicted RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	SHISA6	Q6ZSJ9	500 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	RNF44	Q7L0R7	432 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	LMNTD2	Q8IXW0	634 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	CPNE9	Q8IYJ1	553 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	TTC29	Q8NA56	475 aa	Predicted RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	ZNF480	Q8WV37	535 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	SLCO2A1	Q92959	643 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	MIB2	Q96AX9	1013 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	PWWP2A	Q96N64	755 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	NDN	Q99608	321 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	EBNA1BP2	Q99848	306 aa	Known RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	FAM167B	Q9BTA0	163 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	MFRP	Q9BY79	579 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	MRPS30	Q9NP92	439 aa	Known RBP	20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	ABCF3	Q9NUQ8	709 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	GPR83	Q9NYM4	423 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	TAC3	Q9UHF0	121 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	ZNF451	Q9Y4E5	1061 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	NUP210L	Q5VU65	1888 aa		20.67	■□□□□ 0.9
PKN1-210	ENST00000587429	USP9X	Q93008	2570 aa	Predicted RBP	20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	HYKK	A2RU49	373 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	GFY	I3L273	518 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	MPC1L	P0DKB6	136 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	GABRB3	P28472	473 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	ARHGAP19	Q14CB8	494 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	NKG7	Q16617	165 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	FAM214A	Q32MH5	1076 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	BBS9	Q3SYG4	887 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	DCAF10	Q5QP82	559 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	PIWIL4	Q7Z3Z4	852 aa	Known RBP	20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	CREG2	Q8IUH2	290 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	KLHL7	Q8IXQ5	586 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	C2CD4A	Q8NCU7	369 aa	Predicted RBP	20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	IP6K3	Q96PC2	410 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	PLCD4	Q9BRC7	762 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	PLAC1	Q9HBJ0	212 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	CTSF	Q9UBX1	484 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	COMMD10	Q9Y6G5	202 aa		20.66	■□□□□ 0.9
PKN1-210	ENST00000587429	TTLL8	A6PVC2	850 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429		E7ENX8	843 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429		H0YGG7	62 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	PEX12	O00623	359 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	ARF3	P61204	181 aa	Predicted RBP	20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	GNG11	P61952	73 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	TAP2	Q03519	686 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	PRDX1	Q06830	199 aa	Known RBP	20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	PAQR7	Q86WK9	346 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	RBMXL3	Q8N7X1	1067 aa	Known RBP	20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	FBXO15	Q8NCQ5	510 aa	Predicted RBP	20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	FKBP10	Q96AY3	582 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	FER1L6-AS2	Q96M78	137 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	SPSB2	Q99619	263 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	ZFYVE21	Q9BQ24	234 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	SOX17	Q9H6I2	414 aa	Predicted RBP	20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	LUZP4	Q9P127	313 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	SLC17A6	Q9P2U8	582 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	PYCARD	Q9ULZ3	195 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	PCDHGB7	Q9Y5F8	929 aa		20.65	■□□□□ 0.9
PKN1-210	ENST00000587429	ALOX12B	O75342	701 aa		20.64	■□□□□ 0.89
PKN1-210	ENST00000587429	VPS26A	O75436	327 aa		20.64	■□□□□ 0.89
PKN1-210	ENST00000587429	ALB	P02768	609 aa		20.64	■□□□□ 0.89
PKN1-210	ENST00000587429	PIM1	P11309	404 aa	Predicted RBP	20.64	■□□□□ 0.89
PKN1-210	ENST00000587429	ENO3	P13929	434 aa	Predicted RBP	20.64	■□□□□ 0.89

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms