RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 CCDC190Q86UF4 302 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 SETD6Q8TBK2 473 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 C8orf48Q96LL4 319 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 UROC1Q96N76 676 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 SPASTQ9UBP0 616 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 AGO1Q9UL18 857 aaKnown RBP16.01■□□□□ 0.15
RANBP3-209ENST00000587411 TRPV2Q9Y5S1 764 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 MYO16Q9Y6X6 1858 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 LOC100506127A0A0U1RQW1 187 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 GUCY1B2O75343 617 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 DIRAS1O95057 198 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 KRT6AP02538 564 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 KRT6BP04259 564 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 C21orf33P30042 268 aaPredicted RBP16.01■□□□□ 0.15
RANBP3-209ENST00000587411 HOXC8P31273 242 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 KDELR2P33947 212 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 KRT6CP48668 564 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 PXNP49023 591 aaPredicted RBP16.01■□□□□ 0.15
RANBP3-209ENST00000587411 ARPC4P59998 168 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 ABRQ12979 859 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 ZCCHC8Q6NZY4 707 aaKnown RBP16.01■□□□□ 0.15
RANBP3-209ENST00000587411 CBLL1Q75N03 491 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 ZSWIM9Q86XI8 627 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 MIB1Q86YT6 1006 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 TMCO6Q96DC7 493 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 COL21A1Q96P44 957 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 CDK5RAP1Q96SZ6 601 aaKnown RBP16.01■□□□□ 0.15
RANBP3-209ENST00000587411 ADGRE3Q9BY15 652 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 MARCH7Q9H992 704 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 QPCTLQ9NXS2 382 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 MARCH2Q9P0N8 246 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 KLK4Q9Y5K2 254 aa16.01■□□□□ 0.15
RANBP3-209ENST00000587411 UTRNP46939 3433 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 PLK4O00444 970 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 IGLV3-27P01718 113 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 CR2P20023 1033 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 GGT2P36268 569 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 PIK3CBP42338 1070 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 CDKN2CP42773 168 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 SLC15A1P46059 708 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 RGRP47804 291 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 CPT1AP50416 773 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 CACNG1Q06432 222 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 TUSC3Q13454 348 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 STARD3Q14849 445 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 ZNF551Q7Z340 670 aaPredicted RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 ANKRD46Q86W74 232 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 NLGN4XQ8N0W4 816 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 BEND7Q8N7W2 519 aaPredicted RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 CDCA5Q96FF9 252 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 CRELD1Q96HD1 420 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 HSH2DQ96JZ2 352 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 DDX28Q9NUL7 540 aaKnown RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 TRMT13Q9NUP7 481 aaKnown RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 CPA4Q9UI42 421 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 TSR3Q9UJK0 312 aaKnown RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 CFL2Q9Y281 166 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 TRAPPC4Q9Y296 219 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 CAB39Q9Y376 341 aaPredicted RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 MFN2O95140 757 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 MAPK1P28482 360 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 ZFP69Q49AA0 526 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 TTC23LQ6PF05 361 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 CERS6Q6ZMG9 384 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 SPATC1Q76KD6 591 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 ZZZ3Q8IYH5 903 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 SIMC1Q8NDZ2 872 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 FLCNQ8NFG4 579 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 GGHQ92820 318 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 NELL1Q92832 810 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 BPIFA1Q9NP55 256 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 ADARB2Q9NS39 739 aaKnown RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 SIRT5Q9NXA8 310 aa16■□□□□ 0.15
RANBP3-209ENST00000587411 FNDC3AQ9Y2H6 1198 aaKnown RBP16■□□□□ 0.15
RANBP3-209ENST00000587411 A6NL46 340 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 LOC730098B7Z3J9 87 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 CAPN5O15484 640 aaPredicted RBP15.99■□□□□ 0.15
RANBP3-209ENST00000587411 OR4Q2P0C623 313 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 EPB42P16452 691 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 TACR2P21452 398 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 GRK5P34947 590 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 DDOSTP39656 456 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 SLC19A1P41440 591 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 RGS6P49758 472 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 MRPS15P82914 257 aaKnown RBP15.99■□□□□ 0.15
RANBP3-209ENST00000587411 RING1Q06587 406 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 CDK10Q15131 360 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 TIMM50Q3ZCQ8 353 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 SDHAF4Q5VUM1 108 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 PTRHD1Q6GMV3 140 aaKnown RBP15.99■□□□□ 0.15
RANBP3-209ENST00000587411 TMC5Q6UXY8 1006 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 VTCN1Q7Z7D3 282 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 EFHBQ8N7U6 833 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 RASSF5Q8WWW0 418 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 FUBP3Q96I24 572 aaKnown RBP eCLIP15.99■□□□□ 0.15
RANBP3-209ENST00000587411 OR51E2Q9H255 320 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 ITM2CQ9NQX7 267 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 TBC1D14Q9P2M4 693 aa15.99■□□□□ 0.15
RANBP3-209ENST00000587411 PCDHB8Q9UN66 801 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms