RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 MAP10Q9P2G4 905 aa17.97■□□□□ 0.47
RETREG3-205ENST00000586870 A0A1W2PP18 115 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 DYTNA2CJ06 578 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 OR2AG2A6NM03 316 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 TLR4O00206 839 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 ACOT8O14734 319 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 LSM1O15116 133 aaKnown RBP17.96■□□□□ 0.47
RETREG3-205ENST00000586870 CLDN9O95484 217 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 MS4A2Q01362 244 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 FOXM1Q08050 763 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 TRAP1Q12931 704 aaKnown RBP17.96■□□□□ 0.47
RETREG3-205ENST00000586870 NR6A1Q15406 480 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 VPS26BQ4G0F5 336 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 ZNF648Q5T619 568 aaPredicted RBP17.96■□□□□ 0.47
RETREG3-205ENST00000586870 DHDDSQ86SQ9 333 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 MINDY1Q8N5J2 469 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 FAM174AQ8TBP5 190 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 FBXL8Q96CD0 374 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 ASB9Q96DX5 294 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 NUS1Q96E22 293 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 SPDL1Q96EA4 605 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 MAGEB10Q96LZ2 347 aaPredicted RBP17.96■□□□□ 0.47
RETREG3-205ENST00000586870 GPATCH1Q9BRR8 931 aaKnown RBP17.96■□□□□ 0.47
RETREG3-205ENST00000586870 ZCCHC2Q9C0B9 1178 aaKnown RBP17.96■□□□□ 0.47
RETREG3-205ENST00000586870 TMEM9BQ9NQ34 198 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 CD300AQ9UGN4 299 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 MCM8Q9UJA3 840 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 CCL27Q9Y4X3 112 aa17.96■□□□□ 0.47
RETREG3-205ENST00000586870 NUMA1Q14980 2115 aa17.96■□□□□ 0.46
RETREG3-205ENST00000586870 ANKRD12Q6UB98 2062 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 SLC5A10A0PJK1 596 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 FAM234BA2RU67 622 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 MANBAO00462 879 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 GDF9O60383 454 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 ULK1O75385 1050 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 RECQL5O94762 991 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-205ENST00000586870 KRT6AP02538 564 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 KRT6BP04259 564 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 GSTM1P09488 218 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 THEGLP0DJG4 465 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 KRT6CP48668 564 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 CTSCP53634 463 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 GSTM4Q03013 218 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 DPTQ07507 201 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 MAD2L1Q13257 205 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-205ENST00000586870 RCAN2Q14206 197 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 TRIM25Q14258 630 aaKnown RBP17.95■□□□□ 0.46
RETREG3-205ENST00000586870 AP5B1Q2VPB7 878 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 GGTA1PQ4G0N0 100 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 SYTL3Q4VX76 610 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 TMEM220Q6QAJ8 160 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 TRIM46Q7Z4K8 759 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 IQCHQ86VS3 1027 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 GALNT13Q8IUC8 556 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 RNF148Q8N7C7 305 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 BEND7Q8N7W2 519 aaPredicted RBP17.95■□□□□ 0.46
RETREG3-205ENST00000586870 DENND6BQ8NEG7 585 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 TMEM159Q96B96 161 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
RETREG3-205ENST00000586870 CNOT6Q9ULM6 557 aaKnown RBP17.95■□□□□ 0.46
RETREG3-205ENST00000586870 RNF11Q9Y3C5 154 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 SNX11Q9Y5W9 270 aa17.95■□□□□ 0.46
RETREG3-205ENST00000586870 A0A1W2PR77 199 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 IFRD1O00458 451 aaPredicted RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 PSIP1O75475 530 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 CER1O95813 267 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 WNT1P04628 370 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 ACADSP16219 412 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 ATP6V1C1P21283 382 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 ZFP36L2P47974 494 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 POLR2JP52435 117 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 UFM1P61960 85 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 UAP1L1Q3KQV9 507 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 SPATS1Q496A3 300 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 BCL7AQ4VC05 210 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 Q6ZSR6 202 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 TMEM145Q8NBT3 493 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 USP7Q93009 1102 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 ZNF570Q96NI8 536 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 C1orf50Q9BV19 199 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 GAREM1Q9H706 876 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 ACTR8Q9H981 624 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 RXFP3Q9NSD7 469 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 KLQ9UEF7 1012 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 LEF1Q9UJU2 399 aaPredicted RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 PSMD13Q9UNM6 376 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 H0Y8X5 98 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 H3BNX3 289 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 INPP4BO15327 924 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 EEDO75530 441 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 RPSAP08865 295 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 EPORP19235 508 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 MAP4P27816 1152 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 RABIFP47224 123 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 HLA-BQ31612 363 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 DCP2Q8IU60 420 aaKnown RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 BHLHE22Q8NFJ8 381 aaPredicted RBP17.94■□□□□ 0.46
RETREG3-205ENST00000586870 ATL1Q8WXF7 558 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 VCX3BQ9H321 246 aa17.94■□□□□ 0.46
RETREG3-205ENST00000586870 DNAJC11Q9NVH1 559 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms