RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 TBC1D3LB9A6J9 549 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TAF4O00268 1085 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SLC30A4O14863 429 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 MID1O15344 667 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 BCAT2O15382 392 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PHGDHO43175 533 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PRAMEF10O60809 474 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 E2F6O75461 281 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 NEBLO76041 1014 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CNTN5O94779 1100 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 IGLV3-19P01714 112 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 GYPCP04921 128 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CHRM2P08172 466 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PLEKP08567 350 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SERPINF2P08697 491 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TBC1D3HP0C7X1 549 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 NR2F1P10589 423 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SRCP12931 536 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 GOT1P17174 413 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ENGP17813 658 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 MSNP26038 577 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SLC8A1P32418 973 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 HTR7P34969 479 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SERPINB6P35237 376 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 MTNR1BP49286 362 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SERPINH1P50454 418 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF134P52741 427 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF135P52742 658 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PLK1P53350 603 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 POLE2P56282 527 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 C21orf59P57076 290 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SNRPD1P62314 119 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 MC1RQ01726 317 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 RAD51Q06609 339 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CCDC173Q0VFZ6 552 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PTP4A2Q12974 167 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZBTB17Q13105 803 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PIGHQ14442 188 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 KRT81Q14533 505 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 NAA25Q14CX7 972 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 NOMO1Q15155 1222 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 DLG2Q15700 870 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 HADHQ16836 314 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PARP15Q460N3 678 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TOR2AQ5JU69 321 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CCDC122Q5T0U0 273 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ERMARDQ5T6L9 678 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 STPG1Q5TH74 334 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TBC1D3GQ6DHY5 549 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TBC1D3CQ6IPX1 549 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PLEKHA7Q6IQ23 1121 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TRNP1Q6NT89 227 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 C22orf39Q6P5X5 142 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 KLHL24Q6TFL4 600 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 FIP1L1Q6UN15 594 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ANGPTL8Q6UXH0 198 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 LINGO4Q6UY18 593 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SEM1Q6ZVN7 128 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PLEKHM3Q6ZWE6 761 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF571Q7Z3V5 609 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CPLX4Q7Z7G2 160 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TBC1D3Q8IZP1 549 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 STK40Q8N2I9 435 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PQLC1Q8N2U9 271 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PCDH20Q8N6Y1 951 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 FRMD1Q8N878 549 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 DENND6BQ8NEG7 585 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 OR2T34Q8NGX1 318 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 NSMCE1Q8WV22 266 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 P2RY11Q96G91 374 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZNF419Q96HQ0 510 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CCDC42Q96M95 316 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 AGAP3Q96P47 875 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ACE2Q9BYF1 805 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 C1orf21Q9H246 121 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZDHHC6Q9H6R6 413 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CD93Q9NPY3 652 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 LANCL2Q9NS86 450 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TM7SF3Q9NS93 570 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ABHD10Q9NUJ1 306 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 TMEM248Q9NWD8 314 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 DLL3Q9NYJ7 618 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 CTTNBP2NLQ9P2B4 639 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 UBA2Q9UBT2 640 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 IL36AQ9UHA7 158 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 VPS51Q9UID3 782 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SLCO3A1Q9UIG8 710 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ANAPC7Q9UJX3 599 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 PILRBQ9UKJ0 227 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 INTS6Q9UL03 887 aaKnown RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 FZD10Q9ULW2 581 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 HS3ST2Q9Y278 367 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.64□□□□□ -1.67
ZNF540-204ENST00000586792 SNX10Q9Y5X0 201 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 F5P12259 2224 aa4.64□□□□□ -1.67
ZNF540-204ENST00000586792 RALGAPA1Q6GYQ0 2036 aa4.63□□□□□ -1.67
ZNF540-204ENST00000586792 TNRC6BQ9UPQ9 1833 aaKnown RBP4.63□□□□□ -1.67
ZNF540-204ENST00000586792 A0A0D9SEW6 157 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms