RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 SMU1Q2TAY7 513 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 CAPRIN2Q6IMN6 1127 aaKnown RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 CEP68Q76N32 757 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 DCUN1D3Q8IWE4 304 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 PHC3Q8NDX5 983 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 LRFN3Q9BTN0 628 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 MRPL1Q9BYD6 325 aaKnown RBP19.78■□□□□ 0.76
ATG4D-204ENST00000586417 ACPTQ9BZG2 426 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 FGF22Q9HCT0 170 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 TMEM74BQ9NUR3 256 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 ACSL5Q9ULC5 683 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 SNX6Q9UNH7 406 aa19.78■□□□□ 0.76
ATG4D-204ENST00000586417 FANCMQ8IYD8 2048 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 A0A1W2PR77 199 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 E7ENX8 843 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 THEGLP0DJG4 465 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 CAPN3P20807 821 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 HNRNPH1P31943 449 aaKnown RBP19.77■□□□□ 0.76
ATG4D-204ENST00000586417 TAP2Q03519 686 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 LRP8Q14114 963 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 DOC2AQ14183 400 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 NFATC4Q14934 902 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 RPS6KA2Q15349 733 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 GALNT13Q8IUC8 556 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 SYTL1Q8IYJ3 562 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 PGAM4Q8N0Y7 254 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 LMNTD1Q8N9Z9 388 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 MAGEC3Q8TD91 643 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 RAD51AP1Q96B01 352 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 MTFMTQ96DP5 389 aaKnown RBP19.77■□□□□ 0.76
ATG4D-204ENST00000586417 ELOVL6Q9H5J4 265 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 GPRC5BQ9NZH0 403 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 WDR37Q9Y2I8 494 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 PLEKHM1Q9Y4G2 1056 aa19.77■□□□□ 0.76
ATG4D-204ENST00000586417 SERTM1A2A2V5 107 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 SCAMP1O15126 338 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 NRP2O60462 931 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 ENTPD5O75356 428 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 SLC34A2O95436 690 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 RPL10P27635 214 aaKnown RBP19.76■□□□□ 0.75
ATG4D-204ENST00000586417 CD38P28907 300 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 DPP6P42658 865 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 RABIFP47224 123 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 CLCNKAP51800 687 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 PNLIPRP1P54315 467 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 RACK1P63244 317 aaKnown RBP19.76■□□□□ 0.75
ATG4D-204ENST00000586417 ART3Q13508 389 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 KPNB1Q14974 876 aaKnown RBP19.76■□□□□ 0.75
ATG4D-204ENST00000586417 XKR6Q5GH73 641 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 WDR45BQ5MNZ6 344 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 LYSMD4Q5XG99 296 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 FRG2Q64ET8 278 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 CAPN13Q6MZZ7 669 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-204ENST00000586417 BLOC1S3Q6QNY0 202 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 OR5K2Q8NHB8 316 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 SELENOMQ8WWX9 145 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 ZC3H10Q96K80 434 aaKnown RBP19.76■□□□□ 0.75
ATG4D-204ENST00000586417 FRG2BQ96QU4 278 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 WDR41Q9HAD4 459 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 ZIM2Q9NZV7 527 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 PRPF19Q9UMS4 504 aaKnown RBP19.76■□□□□ 0.75
ATG4D-204ENST00000586417 PCDHGA2Q9Y5H1 932 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 PI4KAP42356 2102 aa19.76■□□□□ 0.75
ATG4D-204ENST00000586417 C9JVG2 144 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 IFRD1O00458 451 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NR5A2O00482 541 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 ANKRD28O15084 1053 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 SLC35G4P0C7Q5 338 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 ERGP11308 486 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NPPBP16860 134 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 KELP23276 732 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 CNR2P34972 360 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 CASP2P42575 452 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NEK2P51955 445 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 THOP1P52888 689 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 UFM1P61960 85 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 YPEL5P62699 121 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 SIM2Q14190 667 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-204ENST00000586417 RCAN2Q14206 197 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 SNCBQ16143 134 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 LPAL2Q16609 132 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 IL23RQ5VWK5 629 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 GRHL2Q6ISB3 625 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 ENPP7Q6UWV6 458 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NET1Q7Z628 596 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-204ENST00000586417 C11orf74Q86VG3 221 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 RETREG3Q86VR2 466 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NEIL2Q969S2 332 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 KLHDC7BQ96G42 594 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 IL17FQ96PD4 163 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 ACTL8Q9H568 366 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 GPR27Q9NS67 375 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 TMEM45AQ9NWC5 275 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NDE1Q9NXR1 346 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 NOP53Q9NZM5 478 aaKnown RBP19.75■□□□□ 0.75
ATG4D-204ENST00000586417 KCNK6Q9Y257 313 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 POLR3HQ9Y535 204 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-204ENST00000586417 CFAP20Q9Y6A4 193 aaKnown RBP19.75■□□□□ 0.75
ATG4D-204ENST00000586417 R4GN57 208 aa19.75■□□□□ 0.75
ATG4D-204ENST00000586417 LRP4O75096 1905 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms