RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 DHPSP49366 369 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 ARRB1P49407 418 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 CCR8P51685 355 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 RAP1GDS1P52306 607 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 HNRNPH2P55795 449 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 ERVPABLB-1P60509 514 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ACSM2AQ08AH3 577 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 BNIP1Q12981 228 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 STX5Q13190 355 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 PRKG2Q13237 762 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ART3Q13508 389 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CUL3Q13618 768 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 DDX39BQ13838 428 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 CYLC2Q14093 348 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 UBAP2LQ14157 1087 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 GAS6Q14393 721 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 HERC3Q15034 1050 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ALG11Q2TAA5 492 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 C18orf21Q32NC0 220 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 ZNF658BQ4V348 819 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 SPIN4Q56A73 249 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SGO1Q5FBB7 561 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 FRG2Q64ET8 278 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ATG9BQ674R7 924 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ACSM2BQ68CK6 577 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CAPRIN2Q6IMN6 1127 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 OGFOD2Q6N063 350 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 LETMD1Q6P1Q0 360 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CEP68Q76N32 757 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ARMCX6Q7L4S7 300 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 LONP2Q86WA8 852 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 FAM160A2Q8N612 972 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 ZNF655Q8N720 491 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 DCBLD1Q8N8Z6 715 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 L3MBTL4Q8NA19 623 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 PCYOX1LQ8NBM8 494 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 TTLQ8NG68 377 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 OR2L8Q8NGY9 312 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 RP9Q8TA86 221 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 MAPK15Q8TD08 544 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ZFPM2Q8WW38 1151 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 DLG3Q92796 817 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 MOCOSQ96EN8 888 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 BMFQ96LC9 184 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CAMK1GQ96NX5 476 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 FRG2BQ96QU4 278 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 OR52B2Q96RD2 323 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SERPINI1Q99574 410 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SLC25A23Q9BV35 468 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 MRPL1Q9BYD6 325 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 TMEM168Q9H0V1 697 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SRMSQ9H3Y6 488 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 KIR3DX1Q9H7L2 352 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 BRF2Q9HAW0 419 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 LRTM1Q9HBL6 345 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SLC24A3Q9HC58 644 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 MRPS30Q9NP92 439 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 TM7SF3Q9NS93 570 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 INTS7Q9NVH2 962 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 EVA1BQ9NVM1 165 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 AHSPQ9NZD4 102 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 ARMCX1Q9P291 453 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 SLC23A2Q9UGH3 650 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CIDEBQ9UHD4 219 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 TAC3Q9UHF0 121 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 BCAP29Q9UHQ4 241 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CA5BQ9Y2D0 317 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 POLR3HQ9Y535 204 aaPredicted RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 PCDHGA2Q9Y5H1 932 aa5.99□□□□□ -1.45
LIG3-206ENST00000586058 CFAP20Q9Y6A4 193 aaKnown RBP5.99□□□□□ -1.45
LIG3-206ENST00000586058 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 A0A1B0GTW7 788 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PIPSLA2A3N6 862 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 GSAPA4D1B5 854 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 OR52A4PA6NMU1 304 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 C2orf74A8MZ97 194 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 B4DGG1 531 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 E7ENX8 843 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 H0YIV9 168 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 TLR4O00206 839 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 MANBAO00462 879 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 NR5A2O00482 541 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ZNF195O14628 629 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 SCAMP1O15126 338 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 BCAT2O15382 392 aaPredicted RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 YKT6O15498 198 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 FKBP9O95302 570 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 CBX6O95503 412 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PDYNP01213 254 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 JUNP05412 331 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 ANXA6P08133 673 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 KRT16P08779 473 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 C1GALT1C1LP0DN25 315 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ALPPL2P10696 532 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 ERGP11308 486 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 PRPS2P11908 318 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 COX4I1P13073 169 aa5.98□□□□□ -1.45
LIG3-206ENST00000586058 NME1P15531 152 aaKnown RBP5.98□□□□□ -1.45
LIG3-206ENST00000586058 AK4P27144 223 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms