RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ARL15Q9NXU5 204 aa13.28□□□□□ -0.28
PRKCSH-202ENST00000585540 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
PRKCSH-202ENST00000585540 STOX2Q9P2F5 926 aaPredicted RBP13.28□□□□□ -0.28
PRKCSH-202ENST00000585540 OARD1Q9Y530 152 aa13.28□□□□□ -0.28
PRKCSH-202ENST00000585540 IKBKGQ9Y6K9 419 aa13.28□□□□□ -0.28
PRKCSH-202ENST00000585540 PTPRQQ9UMZ3 2332 aa13.28□□□□□ -0.28
PRKCSH-202ENST00000585540 ASPMQ8IZT6 3477 aa13.27□□□□□ -0.28
PRKCSH-202ENST00000585540 A0A087WUV0 522 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 AGRPO00253 132 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ZSCAN9O15535 394 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 FAM155BO75949 473 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 OR2B3O76000 313 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 WISP3O95389 354 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 INHBAP08476 426 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ANXA5P08758 320 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 RAB40ALP0C0E4 278 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 PIM1P11309 404 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 PVRP15151 417 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 AGXTP21549 392 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ITPKBP27987 946 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 GRM7Q14831 915 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 TAF1BQ53T94 588 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 THEMIS2Q5TEJ8 643 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 PRAMEF13Q5VWM6 474 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 RHBDD2Q6NTF9 364 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 AGTRAPQ6RW13 159 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 SBSNQ6UWP8 590 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ZNF517Q6ZMY9 492 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 TRIM73Q86UV7 250 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 TAX1BP1Q86VP1 789 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 DSELQ8IZU8 1212 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 UHMK1Q8TAS1 419 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 HNRNPLLQ8WVV9 542 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ZFYVE21Q9BQ24 234 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 TXLNGYQ9BZA5 131 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 PPCSQ9HAB8 311 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 CTNNAL1Q9UBT7 734 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 FETUBQ9UGM5 382 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 TAC3Q9UHF0 121 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 ZNF180Q9UJW8 692 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 LHX6Q9UPM6 363 aa13.27□□□□□ -0.29
PRKCSH-202ENST00000585540 A0A087X1B8 175 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 H3BMH7 237 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 EFSO43281 561 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 KRT38O76015 456 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 IPO13O94829 963 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 ITGB2P05107 769 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 ZNF28P17035 718 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 RORAP35398 523 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 GRK3P35626 688 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 PMS2P54278 862 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 TBPL1P62380 186 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 CXADRP78310 365 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 FASTKQ14296 549 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 NAA30Q147X3 362 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 PCM1Q15154 2024 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 ZIC1Q15915 447 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 PPP1R3AQ16821 1122 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 FAM214AQ32MH5 1076 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 LGSNQ5TDP6 509 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 KIAA1614Q5VZ46 1190 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 ZNF425Q6IV72 752 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 TIPARPQ7Z3E1 657 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 TBC1D1Q86TI0 1168 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 TBC1D19Q8N5T2 526 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 ZNF655Q8N720 491 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 GALNT6Q8NCL4 622 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 OR56A3Q8NH54 315 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 CLIP3Q96DZ5 547 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 MRRFQ96E11 262 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 MVB12AQ96EY5 273 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 NRTNQ99748 197 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 SELENOSQ9BQE4 189 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 DPH7Q9BTV6 452 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 NDC1Q9BTX1 674 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 SGPP1Q9BX95 441 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 CAPS2Q9BXY5 557 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 EPB41L4BQ9H329 900 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 CNOT10Q9H9A5 744 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 NMRAL1Q9HBL8 299 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 FAM60AQ9NP50 221 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 TMEM184CQ9NVA4 438 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 IRAK4Q9NWZ3 460 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 ADAMTS6Q9UKP5 1117 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 PADI2Q9Y2J8 665 aa13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 MTO1Q9Y2Z2 717 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-202ENST00000585540 PKD1L2Q7Z442 2459 aa13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 SNRNP200O75643 2136 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 FREM2Q5SZK8 3169 aa13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 FITM1A5D6W6 292 aa13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 C9J4A7 227 aa13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 ERVH48-1M5A8F1 160 aa13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 MEN1O00255 615 aa13.25□□□□□ -0.29
PRKCSH-202ENST00000585540 PRPF4O43172 522 aaKnown RBP eCLIP13.25□□□□□ -0.292e-9■□□□□ 10
PRKCSH-202ENST00000585540 RIPK2O43353 540 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms